Agrobacterium pusense IRBG74: BN877_II0085
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Entry
BN877_II0085 CDS
T02867
Name
(GenBank) Transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
rir
Agrobacterium pusense IRBG74
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rir03000
]
BN877_II0085
Transcription factors [BR:
rir03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BN877_II0085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_Crp_2
HTH_IclR
MarR
HTH_38
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CDI09886
UniProt:
U4Q822
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Position
linear:76683..77747
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AA seq
354 aa
AA seq
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MNDTPDISRPRQSDIAQRAGVSISTVSRVLAGEKGISASIQTKVLGVAAELGYPLRPATN
QAAGVQLEGKTILALMSAERATGDIGAFYHDIFDVLRSLAQTDGFELDIRLLHQKQIDDS
LIQRVCEVDGLLAIGLDPEEEIIHRITQGVLQPVLVNSADPSMMLDCVSPSNFYGGALAA
RRLLELGHRKVAYIGPHHRHTIRERMRGFRHTILEEKGTTYEEFLLSTADSGFGQAGDAV
RQLLAKNPELTGIFCMNDAIALGALGAAQELGLGVPDDLSIIGFDDLPFAELSTPRLSTI
RVDRREIAREAVDLLRRRLTEPSANARQVQLGVQLVEGQTAGKAKKTGKATRDA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacgcccgacatcagccgtccgcgccagtcggatatcgcccagcgcgccggg
gtctccatcagcacagtctcgcgtgttctcgcaggggaaaaagggatcagcgcgtcgatc
cagaccaaggttctgggagttgcggcggagctcggctaccccttgcgaccggcaaccaat
caggcggccggtgtgcagctggaaggcaagacaatcctcgcgctcatgtccgcggaaagg
gcgacgggcgatattggcgccttttaccacgatattttcgatgtgctgcgcagcctcgcc
cagacggacggtttcgaactcgacatcaggctattgcaccagaagcagatcgacgattcc
ctgatccagcgggtctgtgaggtggacggcctcctggccatcgggctcgatcctgaggag
gagatcatccaccgcatcacgcagggcgtactgcaacctgttcttgttaacagtgctgac
ccctccatgatgctcgattgcgtttcgccttccaatttttacggcggcgcgctggcggcc
cggcggcttctggaactcggccatcgcaaggtcgcctatatcggtccgcatcatcgccac
accatcagggagcgtatgcgcggcttccgccatacgatccttgaggaaaaaggaacgacc
tatgaggagttcctgctttcgacggcagatagcggcttcgggcaggcgggcgacgcggtt
cgccagctgctggccaaaaaccctgaactgacaggcattttctgtatgaatgacgcaatt
gcccttggcgcactcggggcagcgcaggagctgggcctcggcgttcccgacgatctttcc
atcatcggtttcgatgacctgccctttgccgaactttccaccccacgtctcagcacgatc
cgggtcgatcgccgcgagattgcgcgcgaagcggttgacctgctgcggcggcgcctgacc
gagccttccgccaatgcccgtcaggtgcaacttggcgtgcagctggtggaaggacagaca
gccggcaaggcgaaaaagacgggaaaggcgacacgcgatgcatga
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