Agrobacterium pusense IRBG74: BN877_II0400
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Entry
BN877_II0400 CDS
T02867
Symbol
soxD1
Name
(GenBank) sarcosine oxidase, delta subunit
KO
K00304
sarcosine oxidase, subunit delta [EC:
1.5.3.24
1.5.3.1
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00260
Glycine, serine and threonine metabolism
rir01100
Metabolic pathways
Module
rir_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN877_II0400 (soxD1)
Enzymes [BR:
rir01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BN877_II0400 (soxD1)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BN877_II0400 (soxD1)
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Gene cluster
GFIT
Motif
Pfam:
SoxD
EDR4-like_1st
Motif
Other DBs
NCBI-ProteinID:
CDI10200
UniProt:
U4PYL1
LinkDB
All DBs
Position
linear:complement(409088..409408)
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AA seq
106 aa
AA seq
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MLLIRCPYCNETLPEAEFTYAGQAHVVRAADPSSQTDEQWEEFLFIRENVKGPHFERWRH
LHGCGRFFNAVRDTVSDRFLTTYRAGEPRPELSSLTRLTASSEVSK
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgatccgctgcccctattgcaacgaaacgctgcccgaagccgaattcacctat
gccgggcaggcccatgtcgttcgcgccgccgacccgtcgtcgcagacagatgagcaatgg
gaagaattcctgttcatccgcgaaaacgtcaaaggtccgcatttcgaacgctggcggcac
ctgcatggctgcggccgcttcttcaacgccgtgcgcgacacggtgagcgaccgtttcctg
acgacctatcgtgcgggtgagccgcgccctgaactatcctccctgacacgcttgaccgca
agctccgaggtgtcgaaatga
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