Agrobacterium pusense IRBG74: BN877_II0605
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Entry
BN877_II0605 CDS
T02867
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00300
Lysine biosynthesis
rir00470
D-Amino acid metabolism
rir01100
Metabolic pathways
rir01110
Biosynthesis of secondary metabolites
rir01120
Microbial metabolism in diverse environments
rir01230
Biosynthesis of amino acids
Module
rir_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN877_II0605 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN877_II0605 (lysA)
Enzymes [BR:
rir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BN877_II0605 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CDI10405
UniProt:
U4PZA1
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All DBs
Position
linear:615823..617091
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AA seq
422 aa
AA seq
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MNHFGYIDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMK
ANSNQAVLKTLAKLGAGIDVVSGGELRRALAAGVPANRIMFSGVGKTVAEMDYALDVGIY
CFNIESEPELEVLNLRAIKAGKRAHVSFRINPDVDARTHAKISTGKKENKFGISYERARA
VYAHAATLPGIEVTGIDMHIGSQITELQPFEDAFRLLRELVEALRGDGHAISHVDIGGGL
GIPYRDDNNPPPLPDAYAHIVKNELKSLNCKIVTEPGRLIVGNAGILVTEVIYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHGIRPVVQPAEDTPRIKADIVGPVCETGDYLALDREMAA
PQPGDLIAVSSAGAYGAVQAGTYNSRLLVPEVLVKGDKFHVIRPRGTYEELIALDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccattttggctatatcgacggcgtgctgcacgccgaaaacgtgcccgtgcccgag
atcgccaaggcggtcggcacgcccttctacgtctattcgaccgcaaccctggagcgccac
tacaaggttttctcaggtgcgtttgccgatgtggacgccatggtctgttatgccatgaag
gccaattccaaccaggcggtgctgaagacgctggcaaagctcggcgctggcatcgacgtc
gtctccggcggtgaattgcgtcgcgctctggctgctggcgtgccggcaaaccgcatcatg
ttctccggcgtcggcaagacggttgcggaaatggattatgcgctggatgtgggcatttat
tgtttcaacatcgaatccgagccggagctggaagtcctcaatctgcgcgccatcaaggcg
ggcaagcgggcgcatgtctccttccgcatcaaccctgatgtggatgcgcgcacccacgcc
aagatttccaccggcaagaaagaaaacaagttcggcatttcctatgagcgggcgcgcgcc
gtctatgcccatgctgcaaccctgcccggcatcgaagtcacgggcatcgacatgcatatc
ggcagccagatcaccgagttgcagcctttcgaagacgccttccggctgctgcgcgaactg
gtggaagcgcttcgcggcgatggccatgcgatcagccacgtcgatatcggcggcggcctc
ggcattccctaccgcgacgacaacaatccgccgccgctgccggatgcctatgcgcatatc
gtcaagaacgagttgaaaagcctcaactgcaagatcgtcaccgagcccggccgtctgatc
gtcggtaatgccggcattctggtaacggaagtcatctatgtgaaggatggcggcgaaaag
acctttgtaatcgttgacggcgcgatgaacgacctcatccgtcccacactgtatgaggcc
tatcacggcatccgcccggtggtgcaaccggcagaggatacgccgcgcatcaaggccgat
atcgtcggcccggtctgcgaaaccggcgattatctggcgctggaccgtgagatggccgca
ccgcaaccgggcgatctcatcgccgtcagttccgctggtgcctatggtgcggtgcaggca
ggaacctataattcccgcctgctggtgccggaagtgctggtcaagggtgacaaattccac
gtcatccgcccccgcggcacgtatgaagagctgatcgccctcgattccgtgcccgcctgg
ctcgactga
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