KEGG   Agrobacterium pusense IRBG74: BN877_II0605
Entry
BN877_II0605      CDS       T02867                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rir  Agrobacterium pusense IRBG74
Pathway
rir00300  Lysine biosynthesis
rir00470  D-Amino acid metabolism
rir01100  Metabolic pathways
rir01110  Biosynthesis of secondary metabolites
rir01120  Microbial metabolism in diverse environments
rir01230  Biosynthesis of amino acids
Module
rir_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rir00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BN877_II0605 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BN877_II0605 (lysA)
Enzymes [BR:rir01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     BN877_II0605 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: CDI10405
UniProt: U4PZA1
LinkDB
Position
linear:615823..617091
AA seq 422 aa
MNHFGYIDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMK
ANSNQAVLKTLAKLGAGIDVVSGGELRRALAAGVPANRIMFSGVGKTVAEMDYALDVGIY
CFNIESEPELEVLNLRAIKAGKRAHVSFRINPDVDARTHAKISTGKKENKFGISYERARA
VYAHAATLPGIEVTGIDMHIGSQITELQPFEDAFRLLRELVEALRGDGHAISHVDIGGGL
GIPYRDDNNPPPLPDAYAHIVKNELKSLNCKIVTEPGRLIVGNAGILVTEVIYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHGIRPVVQPAEDTPRIKADIVGPVCETGDYLALDREMAA
PQPGDLIAVSSAGAYGAVQAGTYNSRLLVPEVLVKGDKFHVIRPRGTYEELIALDSVPAW
LD
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtgaaccattttggctatatcgacggcgtgctgcacgccgaaaacgtgcccgtgcccgag
atcgccaaggcggtcggcacgcccttctacgtctattcgaccgcaaccctggagcgccac
tacaaggttttctcaggtgcgtttgccgatgtggacgccatggtctgttatgccatgaag
gccaattccaaccaggcggtgctgaagacgctggcaaagctcggcgctggcatcgacgtc
gtctccggcggtgaattgcgtcgcgctctggctgctggcgtgccggcaaaccgcatcatg
ttctccggcgtcggcaagacggttgcggaaatggattatgcgctggatgtgggcatttat
tgtttcaacatcgaatccgagccggagctggaagtcctcaatctgcgcgccatcaaggcg
ggcaagcgggcgcatgtctccttccgcatcaaccctgatgtggatgcgcgcacccacgcc
aagatttccaccggcaagaaagaaaacaagttcggcatttcctatgagcgggcgcgcgcc
gtctatgcccatgctgcaaccctgcccggcatcgaagtcacgggcatcgacatgcatatc
ggcagccagatcaccgagttgcagcctttcgaagacgccttccggctgctgcgcgaactg
gtggaagcgcttcgcggcgatggccatgcgatcagccacgtcgatatcggcggcggcctc
ggcattccctaccgcgacgacaacaatccgccgccgctgccggatgcctatgcgcatatc
gtcaagaacgagttgaaaagcctcaactgcaagatcgtcaccgagcccggccgtctgatc
gtcggtaatgccggcattctggtaacggaagtcatctatgtgaaggatggcggcgaaaag
acctttgtaatcgttgacggcgcgatgaacgacctcatccgtcccacactgtatgaggcc
tatcacggcatccgcccggtggtgcaaccggcagaggatacgccgcgcatcaaggccgat
atcgtcggcccggtctgcgaaaccggcgattatctggcgctggaccgtgagatggccgca
ccgcaaccgggcgatctcatcgccgtcagttccgctggtgcctatggtgcggtgcaggca
ggaacctataattcccgcctgctggtgccggaagtgctggtcaagggtgacaaattccac
gtcatccgcccccgcggcacgtatgaagagctgatcgccctcgattccgtgcccgcctgg
ctcgactga

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