Agrobacterium pusense IRBG74: BN877_II0650
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Entry
BN877_II0650 CDS
T02867
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BN877_II0650 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rir03016
]
BN877_II0650 (trmU)
Enzymes [BR:
rir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
BN877_II0650 (trmU)
Transfer RNA biogenesis [BR:
rir03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BN877_II0650 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
QueC
Arginosuc_synth
NAD_synthase
DUF7411
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
CDI10448
UniProt:
U4Q378
LinkDB
All DBs
Position
linear:complement(661686..662894)
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AA seq
402 aa
AA seq
DB search
MGKNVNTLDFDKRPEDTRIVVAMSGGVDSSVVAGILKREGYDVLGITLQLYDHGAAVHRA
GSCCAGQDIDDARRVCETLGIPHYVLDYEARFRETVINPFAEAYAMGETPIPCVACNQTV
KFADLLATAQELGADALATGHYIRSRPNPVPGQAGRRALYRPIDSDRDQSWFLFATTQEQ
IDYLRFPLGGLSKAETRALAEEMGLVVAKKADSQDICFVPQGKYTDIINKLKPNAALAGD
IVHLDGRVLGRHDGIVHYTIGQRRGIGVATGEPLYVVHLDARGRRVIVGPREALETRRVY
LRDMNWLGDGDLAVDAGQGFACFAKVRSTRPPTEAVLHADENGIYVDLMTGEAGVAPGQA
CVLYSAPGADARVYGGGFIERSERSAEAEASLKALLEKPVAA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaacgtgaatacgctcgattttgacaagaggccggaagatacccggatcgtt
gtcgccatgtccggtggcgtcgattcttctgttgtggccggtatcctcaagcgcgagggc
tacgatgtcctcggcatcaccctccagctatatgaccatggcgccgccgtgcaccgcgcc
ggctcctgttgcgccggccaggatatcgacgatgcgcgccgggtctgcgaaacgctgggc
atcccccattacgtgctggattatgaagcgcggttccgtgaaaccgtcatcaaccccttt
gcggaagcttatgcgatgggtgagacccccattccctgtgttgcctgcaaccagacggta
aaattcgccgatcttctagcgaccgcgcaggaactgggtgccgatgcgctggccacgggc
cactacatccgttcgcggcccaaccccgttcccggccaggcgggccgccgcgcgctctat
cggccgatcgacagcgaccgcgaccagagctggttcctgttcgcaaccacgcaggaacag
atcgattatctgcgctttcccctcggtggcctctccaaggccgaaacgcgggctttggcg
gaagaaatggggcttgtcgttgccaagaaggccgacagccaggatatctgtttcgtgccg
cagggcaaatataccgatatcatcaacaagctgaagccgaatgcggctctggcgggtgat
atcgtgcatctcgacgggcgtgtgctcggccgccacgatggcatcgtgcattatacgatc
ggccagcgccgcggtatcggtgttgcgacgggcgagccgctttacgtcgtgcatctcgat
gcgcgtggccgccgggtcatcgttggcccgcgtgaggcgctggaaacccgccgcgtctat
ctgcgtgacatgaactggctgggtgatggcgacctggccgttgacgccgggcagggcttc
gcctgtttcgccaaggtgcgttccacccgtcctccgacggaggcagtgctgcatgcggat
gagaatggtatctatgtcgacctgatgaccggagaggcgggtgtcgcgcccggtcaggcc
tgcgtgctttattccgcgccgggcgcggatgcccgcgtgtacggcggcggtttcattgaa
cggtccgagcgctcggcggaggccgaggcgtcgctcaaggcgcttctggaaaagccggtt
gccgcctga
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