Agrobacterium pusense IRBG74: BN877_II0886
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Entry
BN877_II0886 CDS
T02867
Name
(GenBank) putative oligopeptide ABC transporter, substrate-binding component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN877_II0886
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rir02000
]
BN877_II0886
Transporters [BR:
rir02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BN877_II0886
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CDI10682
UniProt:
U4QE15
LinkDB
All DBs
Position
linear:complement(909793..911355)
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AA seq
520 aa
AA seq
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MRKSAVFLCLAACASFAVSPAIAKDIKVGLSGTVTSVDPHFYNASPNNSIAMQIFDRLTE
RTAEGQLVEGLATKWEAVSETKWRFTLREGVKWHDGKPFTADDVVFTLSRAGNVPNSPGG
FGGFIRNVASVETDGNLAVLITTKAPAPTLPGDLANIAVISRHVGEGADTADYNSGKAAI
GTGAFRFSTFKQGIEVGLERNPDWWGKKVAWDHATYRMISSTSARTTAILAGDVDIIDAP
AATDIARFKSTANLSFVSTPGLRVIYLAPTTSGESWKANVKGPNGEVLETNPLADARVRN
ALSVAINRQGIVDKIMEGTATASGQWLPKGAFSYTDDIQPPKPDATSAKKMLADAGFPNG
FQLTVHVPNDRYPNAPAVVQAVAQMWTRIGVKTNVEALPWTTFSSRKSEFSMKLLGLGNA
TYDASSMLVNVIGTVDPKRGLGASNDSGYSNPALDDLVAKAMTIYDDKARETALVEAVKV
AVNDGAIIPLYQQSNAWVTRKGLSYAPRIDERTLVKDISE
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaagtgcggtttttctatgcttggcggcctgcgccagctttgcggtttctccg
gctattgcgaaggatattaaggtaggattgagcggcaccgtgacatcggttgatccgcat
ttttataatgcctctccaaacaacagtatcgccatgcagatattcgacaggctgaccgag
cggacagccgaagggcagcttgtcgagggccttgcaacgaaatgggaggccgtttccgaa
accaaatggcgttttacccttcgtgagggcgtaaaatggcacgacggaaaacccttcacc
gccgatgacgttgttttcacgctcagccgcgctggaaatgttccaaatagccccggcggg
ttcggcggtttcatcagaaatgtcgcaagcgtcgaaaccgatggaaatcttgcggtcctc
atcaccacgaaggcaccggcgcctacccttccgggcgatcttgccaatatagcggtcata
tcccggcacgtcggggagggcgcggacacagcagactacaattccggaaaagcggcaatc
ggcaccggcgcctttcgcttctcgactttcaagcagggcatcgaagttgggctggagcgc
aatccagactggtggggcaagaaagtggcctgggaccatgcgacctaccgcatgatctcc
agcaccagcgcgcgcaccacggctattctggcgggtgatgtcgacattatcgacgccccc
gccgcaaccgatatcgcgcgattcaagtcgacagcaaatctttccttcgtctccacgccc
ggtctgcgcgtgatctatctggcgccgacgacctcgggagagagctggaaagccaatgta
aaggggccgaatggtgaagtgctggagacaaacccgcttgccgatgcacgcgtccgcaac
gctttgtccgtggcgataaaccgtcagggtatcgtcgataagatcatggaaggtacagcc
acggcatccggccagtggctgcccaaaggtgccttctcctacaccgacgacattcaacca
ccgaagccggacgcgacaagcgccaagaagatgctggccgatgctggcttcccgaacggt
ttccagctgacggttcatgtgccgaacgaccgctatcccaatgcgcctgccgtcgttcag
gccgtcgcgcagatgtggacgcgcattggcgtgaagacgaatgtggaggcccttccatgg
accaccttctcttcgcgcaaatcggaattctccatgaagctgctggggctcggtaacgcc
acctatgatgcaagctccatgttggtgaacgttatcggaaccgttgatccgaagcgtgga
ctgggtgcttcaaatgacagcggatactccaatccggcactcgatgatctcgtcgcgaag
gcgatgacgatctacgacgacaaggctcgcgagacggcccttgtggaggcggtcaaggtt
gcggtaaatgacggcgccatcataccgctttaccagcagagcaatgcctgggttacgcgc
aaaggcctgtcctatgcaccgcggattgatgagcgtacgctcgtgaaggatatatccgaa
taa
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