Agrobacterium pusense IRBG74: BN877_II1077
Help
Entry
BN877_II1077 CDS
T02867
Name
(GenBank) putative ABC transporter (substrate-binding protein)
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN877_II1077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rir02000
]
BN877_II1077
Transporters [BR:
rir02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BN877_II1077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CDI10868
UniProt:
U4Q4C3
LinkDB
All DBs
Position
linear:1112332..1113942
Genome browser
AA seq
536 aa
AA seq
DB search
MHAQLTRKASRARSRLVAAIIALSACVAGFGTDASATTMMAVPHSGLRILDPIITTAHIV
RNHGYMIYDTLLALDADFKPQPQMADYTVSDDKLTYTFTLRDGLKWHDGTPVTAEDCIAS
LQRWGKRDTSGQILFDKTESLTATDDRTFVFKLKEPFGFLPDVLAKPSSVVPFMMPKRIA
ATPADTAITEFVGSGPFRFVTAEYQPGVKAVYEKFTDYVPRNEPASWLAGGKVVKVDRVE
WLSMPDAQTAINAIQSGEIDYIEAPPVDLLPLVESNDELTVKTLNTLGSQTMGRMNFLYP
PFDNKKIRQAALKAMNQKDVLDALIGNPDYYTICGSVFGCGTPLEALAGSESLTGAGDME
SAKALLKEAGYDGTPVVILQPTDVVTVKAQPVVAAAALRAAGFNVELQPMDWQTLVTRRA
SQKPVAEGGWNMFFTNWIVPEIMTPLNNPMLNGRGAKGFFGWQTDEKLEALRAKYIAAAT
AKEQKAAAAELQAHAMDEVSYVPLGQYKNPSVWRNQLSGFLESPVPVFWNIEKTED
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctcagttgaccagaaaagcaagccgggcaagaagccggctcgttgcggcgatc
atcgccctttcagcctgtgttgcgggctttggaacggatgcctcggccacaacaatgatg
gccgtaccgcattctggcctgcgtattctcgatccgatcatcacgaccgctcatatcgtg
cgcaatcacggctacatgatctatgacacgctgctggcgcttgatgccgatttcaaaccg
cagccccagatggctgactacactgtttcggatgacaagctgacctatacattcacgctg
cgcgacggtctgaaatggcacgacggcacacctgtgacagcagaagactgcattgcctcg
cttcagcgctggggcaagcgggatacttccggtcagatcctcttcgacaagacagaaagc
ctgacggctacggacgacaggacctttgttttcaagctgaaggaacccttcggcttctta
cccgacgttctggccaagccgtcttcggtcgtgccgttcatgatgccgaaacgtattgcc
gcaaccccggccgataccgccattaccgaatttgtcggttccggccccttcaggttcgtc
acggccgagtaccagccgggcgtcaaggcggtctatgaaaaattcaccgattacgtaccg
cgcaacgagcctgcgagctggctggccggcggaaaggtggtcaaggtcgaccgtgtggaa
tggttgagcatgcccgatgcccagaccgcaatcaacgctatccagtccggggagatcgac
tatatcgaagctccgccggttgatcttctaccacttgtcgagagcaatgacgaactgacc
gtcaagacgctaaacacgcttggctcgcagaccatgggccgcatgaatttcctctacccg
ccattcgataacaagaagatccgccaggctgctctcaaagcgatgaaccagaaggatgtt
ctcgacgcgctgatcggcaatccggactactacaccatctgcggctccgtcttcggctgc
ggtacgccgcttgaagcactggccggttcggaaagcctgaccggcgcgggcgatatggaa
agcgcaaaggcactccttaaggaggccggttacgacggaactcccgttgtcatccttcag
ccaaccgacgtcgtgaccgtcaaggcccagcccgtcgtggcggcggctgcgctgcgggct
gcgggcttcaacgtcgaacttcagcccatggactggcagacgctcgtcactcgccgcgcc
tcgcagaagccggtggctgagggtggctggaacatgttcttcaccaactggattgtgccg
gaaatcatgacgccgcttaacaatccgatgttgaacggtcgcggcgccaagggatttttt
ggctggcagacggacgagaagctggaagcgttgcgcgccaaatacatcgccgcggcgaca
gctaaagagcagaaggctgcggccgccgagcttcaggcccatgccatggacgaggtcagc
tacgttccgcttggccagtacaagaacccctccgtgtggcgcaaccagctttccggcttc
ctggaatcgccggttcccgtgttctggaacatcgagaaaacagaagactga
DBGET
integrated database retrieval system
