Agrobacterium pusense IRBG74: BN877_II1164
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Entry
BN877_II1164 CDS
T02867
Name
(GenBank) Topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rir
Agrobacterium pusense IRBG74
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rir03032
]
BN877_II1164
03400 DNA repair and recombination proteins [BR:
rir03400
]
BN877_II1164
Enzymes [BR:
rir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BN877_II1164
DNA replication proteins [BR:
rir03032
]
Prokaryotic type
DNA Topoisomerases
BN877_II1164
DNA repair and recombination proteins [BR:
rir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN877_II1164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CDI10955
UniProt:
A0A1L9CDF1
LinkDB
All DBs
Position
linear:complement(1199937..1200953)
Genome browser
AA seq
338 aa
AA seq
DB search
MPQPPTRLLAKIGLAYVSDQEPGISREKRGRGFCYRLPGGELLCDSDELKRIKSLGVPPA
YKDVWICIDPSGHLQATGFDARGRKQYRYHPDWHTLRGETKFFQLKSFGRALPAIRRRAM
ADVGKQDHGQEMTLAALTLLLDAAYLRVGNRSYLESNGTYGATTLLKRHVSFGETIELRF
AAKGGQKVKRQLRHPRLQKILEEIADLPGKELFVWQDSENRVHSVDSSDLNAYLSRIGGQ
GISAKTFRTWGGTLAAFCNAMEHVAAGEKPSIKGMCQAAATELSNTPAICRKSYVHPAVL
DIATEEKAQKKLSRILKVGAKPVSGLRADERRLLAFLP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccacagccgccaacccgccttcttgccaaaatcggacttgcctatgtcagtgatcag
gaaccgggtatttcccgcgaaaaacgcggacgcggtttctgttaccggctgccgggcggc
gaactcctctgcgatagtgatgagctgaagcgcatcaaatcgctcggtgtaccgcccgcg
tataaggatgtctggatctgcatcgacccgtcggggcatctgcaggccaccgggtttgat
gcccgcggccgaaagcaatatcgttatcatcccgactggcatacgctcaggggagaaacg
aagttcttccagctcaaaagcttcggaagggcgctccctgccatccgccgtcgcgccatg
gccgacgtcggtaaacaggaccatgggcaggaaatgacgcttgcagccctcaccctgttg
cttgatgccgcctatttgcgcgtcggaaatcgctcctatcttgagagtaacggcacctat
ggcgcaacgacattgctcaagcggcacgtttcgttcggtgaaaccatcgaattgcgcttc
gccgccaaaggcgggcaaaaggtgaaacggcaattacgccacccccgcctccagaaaatt
cttgaagagatcgccgatctgcccggcaaggaactcttcgtctggcaggatagtgaaaac
cgggttcactccgtcgattccagcgatctcaacgcatatctctcacgcatcggcggccag
ggcatttccgccaagaccttccgcacctggggcggaacgctcgcggccttctgcaacgcc
atggagcatgtggcagccggtgaaaaaccgagcataaaaggcatgtgccaggctgcggcg
accgagctttccaatacgcctgccatctgccgcaagagctatgtgcaccccgctgttctc
gatatcgccacggaggaaaaggcccagaaaaagctcagccgcatcttgaaggtcggggca
aaacccgtctccggcctcagggcggacgaaagacgcctgctggcctttttaccctga
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