Agrobacterium pusense IRBG74: BN877_II1568
Help
Entry
BN877_II1568 CDS
T02867
Name
(GenBank) conserved protein of unknown function
Organism
rir
Agrobacterium pusense IRBG74
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
G8
Motif
Other DBs
NCBI-ProteinID:
CDI11354
UniProt:
U4Q260
LinkDB
All DBs
Position
linear:1644875..1648846
Genome browser
AA seq
1323 aa
AA seq
DB search
MSGCFCLFLDGETSPESIACRKAAGRLSVFGTGWFLSILLSVSLGQSACAETLNWTGAGG
GSWSASTNWAPSAHVPDAGDDVLINSDGPVVVASTSATANSVTVGQVSSGTLVINGSLLS
NSLSLGVAAGIGGTVTFSGATLQNQGLLSVGGNGIGTLSLLHGSAVSTGTVYIGEGATGN
GFLTLDNSSSLVTAGTIFVGYGGGSAPSGGGNGELKILAGSTVDSQRAILGEGAGTEGAT
LISGAGSRWTVAADTVIGNAGVSTLTVTGGGKLLSGTTTVIANLYSASGSEVTLTRLGSS
LETGQLIVGNEGSARLTVEAAASATSDSAIIGRHSTSVATVTGDGSTWVAGDLQIGGDVA
DPGGASGNGTLNVTAGGKVNSTAARLGTVAGATGAAIIDGEGSAWTVGSGGLAIGDAGTG
SLAVTGGGIVGSQAVVLGNSAASTGSARISGVGSTLRSEGDIIVGRGGNAMMSVEAGGAV
ESRNGVVAALGGSSSSVTVTGGGSSWTMTGTLIAGYQDTASAEVTASAGGNIRAGEVVLG
DLSGSSGTMTIMGASSNVTAYVDSGLGASGRMTVGQSGSGGLTVTNGASLNAYLFSVGSS
AGSDGAVLVNGIGSRVSVGDTLVIGAAGNGSVEVTGGAALAAPTILIASSAGSAGVLNVG
AASGQTARSAGTIDAQAISFGAGAGRIVFNHSQTAYLVKADISGAGSVVAENGVTTLAGN
NSYSGGTTISGGTLKGIAGSFGSGEIANDAALVVDGAGRLSNAIHGTGSFEKTGAGNLEL
SAVSTYLGPTTVSGGKLSVNGSLASAVSVVDGAALGGTGTVAGLSIGPGGTLAPGNPLGT
LTSTGDATFAAGGKYAVDIDTAGNSDRLAVNGTVTIANDVTLVVTPLTNRSAFSLNTRYQ
ILTATGGITGAFSRIDESFAYLTATIAKSDDTGTAYLSFSPASSAPGFLAAQATTANARA
AANAVEALGENAALYRSAIFLQGGETQLAFSQLAGEIHPSVAMTLINRSSQTRDVILERL
RRAFDSIDARPIMPVAFVKDDGGLLFEEEGSPSFWTSGLGSRGRVDGDGNGSSVDSKGGG
ILFGLDGELGKSWRAGVAGGYSHERIKQKTFAASAEVDSYFVAAYAGTMIGPASLRFGAI
HAFQDMDTRRSVSFSTLSENLFASYGGSTSQVFAEAAWRFDFDLTHVEPYANIAYVNSRT
GDFGEKGGIAAVSSASARYDQLYTTLGARITRDVALEGMLGRAMFDLAWRHNYGDTDMNS
SLFYEGGEAFSVVSTRGSRDAATLNLGLSYDLTPSATLTFRYGAVFGAGLLDQSAAAELG
VRF
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgtccggttgtttctgcctctttttggatggggaaacctctccggaaagtattgcatgc
aggaaagctgccgggcgcctttcggtgttcggcacaggctggtttttgtcgattcttctt
tccgttagccttggtcagagtgcttgtgcggaaaccttgaactggaccggcgctgggggc
ggcagttggtctgcctcgacgaactgggcgccgtcagcccacgtgcccgatgccggcgat
gacgtgttgatcaacagcgatggcccggttgtcgtggccagcacatctgccacggccaat
tccgtcacggtcgggcaagtttcgtccggtactttggttatcaatgggagcctgttatca
aattcgctcagccttggcgtcgccgcgggaatcggtggtaccgtcacgttctcgggcgcg
accctgcaaaaccagggtctcttatcggtcggcggtaacggcatcggtaccctctccctg
ttacatggcagcgcggtctcgaccgggaccgtctacatcggcgaaggggcaacagggaac
ggtttcctgacactcgacaattcgtccagtctcgttacggcaggcacgatctttgtggga
tacggcggcgggtccgcgccctccggcggcggaaacggcgagcttaaaattcttgccgga
agcacggtagacagccaaagggccattctgggcgagggggctggaaccgaaggtgccacg
cttatatcgggcgccggcagccgctggacggttgcagccgacaccgtcatcggcaatgcc
ggtgtcagcacactcacggtgacgggcggcggaaaactcctcagcggaacgacaaccgtc
attgccaatctttattccgcatcgggaagcgaagtcactcttacccggctcggctcttca
ctggaaaccggtcaattgatcgttggaaatgagggcagtgctcgcctgactgtcgaggcg
gcggcatcagcgaccagcgacagcgccatcatcggacgccattccacctccgttgcgacg
gtgaccggcgacgggtccacctgggtcgcgggcgatcttcagatcggtggcgatgtcgcc
gaccccggcggggcttccggtaacggaaccttgaatgtgaccgccggtggcaaggttaat
agcaccgccgcccggctcggcactgttgccggcgcgaccggggcagccattatcgatggc
gagggatcggcctggactgtcggcagtggcggccttgcgatcggcgatgccggcaccgga
tcgttggccgtaacgggtggcggcatcgtcggcagtcaagccgtcgtactcggcaacagt
gccgccagtaccggctccgcccggatttccggcgttggcagcacgttgcgcagcgagggt
gacatcatcgtcggtcgcggtggcaacgccatgatgtcggttgaagcagggggggctgtc
gagagtagaaacggtgtcgtcgctgcgctcggcggttcgtcgtcatcggtcactgttacc
ggcggtggctccagctggacgatgaccggtaccttgatcgccggttatcaggacacggct
tctgccgaggttacagccagcgccggcggaaatatccgggcaggggaggtggtcctggga
gatctttcgggctcatcgggaacgatgaccatcatgggtgccagctcgaatgtaacggct
tacgtcgatagcgggcttggggcttccggccgcatgacggtcggacaatccggttccggc
ggtttgactgtgacgaatggtgcgtcgctcaatgcctatctgttttccgtgggttcttcg
gcggggtctgatggggccgtcctcgtcaacggcatcggctcgcgcgtctccgttggcgac
accttggtcatcggcgctgcggggaacggcagcgttgaagtaaccggcggcgcagcgctc
gcggcgcctaccatcctcattgcgtcgtctgctggttcggctggcgtcctgaatgtcggc
gcagcttccggacaaacggcccgttcggccggcaccattgacgctcaggcgatcagcttt
ggagccggcgctggccggatcgttttcaatcactcgcagacggcgtacctcgtaaaagcc
gatatttcgggagcgggcagcgttgttgctgaaaatggcgtgacgacgcttgctggaaac
aacagctattccggcggcaccacgatatctggcggtaccttgaagggaatcgctggaagt
tttggctccggcgagatcgccaatgacgcggcgctggtcgtggatggcgccggcaggctt
tcgaatgcgattcacggcacgggcagtttcgaaaagactggcgcaggcaacctcgaactc
tcggccgtcagcacttatctgggtccgacgacagtctcaggcggaaagctgagcgtcaat
ggctcgttggcgagcgcggtttcagtggtcgacggcgcggcgctcggcggtacgggtacc
gttgccggcctttccatcggtccgggcgggacgctggctccgggtaatccgcttggaacg
ttgacatcgacaggcgacgctacattcgctgcgggcggcaaatatgcggttgatatagat
accgccgggaattccgacaggcttgctgtgaacggtaccgtaacaatcgccaatgatgta
accctcgtcgtcacgccgctgacgaaccgatctgctttcagtctgaatacgcgctaccag
atactcactgcgacgggtggcataaccggcgctttttcccgcatcgatgagagctttgcc
tatctgaccgctaccatcgcaaagagcgacgacactggcaccgcttatctgtcgttcagc
ccggcatcgtcggcccccggatttcttgccgcgcaagcgaccacggccaatgcgcgagcc
gcggccaacgccgttgaggccctcggagaaaatgcagccctgtatcggtccgccattttc
cttcagggcggtgaaacgcaactggcattttcgcagcttgccggagaaatccacccgtct
gttgccatgaccttgatcaatcgcagcagccaaacccgggacgtcattctagaacggctg
cgccgcgctttcgacagcatcgatgcgcggccaatcatgcccgtcgcttttgtgaaggac
gacgggggcctcttgttcgaggaagaaggatcgccgagcttctggactagcggtttggga
tcgcgtggacgtgttgatggcgatggcaatggctcatcggttgatagcaagggcggcggc
attctgttcggacttgatggtgagctcgggaaaagttggcgcgctggtgtggcgggcggt
tacagtcacgagaggatcaagcagaagacatttgctgcttcagcagaggtcgacagttat
tttgtggctgcttatgcgggcacgatgatcgggcctgcgtctctgcggtttggggcgatc
catgcttttcaggatatggatacgcgccgctcggtctctttctcgacactcagcgaaaac
ctcttcgccagctatggcggctcgacgtcgcaggtctttgccgaagcagcctggcgtttc
gattttgatctgacccatgtcgagccctatgccaacatcgcctacgtaaacagccgcacc
ggagattttggcgaaaaaggcgggatcgccgcagtatcctcagcatcggcacgctacgat
cagctttacacgacgctcggtgcgcgcatcacgagggatgtcgcgctggaaggcatgctt
ggccgcgcaatgttcgatctcgcctggcgtcacaattatggcgacactgacatgaacagc
agccttttctacgaaggcggcgaggcgttttcggtcgtgagcacgagaggttcgcgagac
gcagcaacacttaatctggggctaagctacgatctcacgccatcggctacgttgacattc
cgttatggtgcagttttcggcgctgggctgctagatcagtccgctgccgccgaacttggg
gttcgcttttga
DBGET
integrated database retrieval system
