Agrobacterium pusense IRBG74: BN877_II1676
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Entry
BN877_II1676 CDS
T02867
Name
(GenBank) Type IV secretory pathway, VirD4 component
Organism
rir
Agrobacterium pusense IRBG74
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
CDI11462
UniProt:
U4QGH9
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Position
linear:1770607..1772178
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AA seq
523 aa
AA seq
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MPFRIWKPLLGFMFILIIVTFVIGMGGRHFLEQTGFGHGSPVYIIPDFLTLLALAAITFR
FITAPLILHFGENEDETHGSARFAADKEIAALTASGSGLLIGRDTKTTRPLRYDGPAHLL
TMAPTRTGKGVGTIIPNQLTADRSVICVDPKGENARITGHARQKFGPVRVLDPFAVTGRP
SAAFNPLAMLDPQNLDVAEDASALADALVFDEPGMAGEAHWNEEAKALIAGLLLEIVSAE
PLRHRHLATLRDYLTLAPGQFAALLKHMQDSDAASGLVARAANRHLGKSDREAAGVLSAA
QRHTHFLDSPRMAAVLSRSDFRFADLKRNNITVFLVLPPDRLSTYSRWLRLLVLQSLVEM
ARDPTKPVTPVLYLLDEFASLGHLAPVERAMGLMAGYGVQLWPVLQDIHQLRAAYGHRAG
TFLSNAGVLQVFGVNDHHSARLISDLLGQETVVFQTMARALDSDKTGISYSQQHTGRPLL
TPDEVRNLPGHGQLLFLAGQRPVFADKLAYFADPEFREMFDPV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccggatctggaaaccgcttctcggatttatgttcatcctcatcatcgtcacg
ttcgtgatcggcatgggtggccgtcatttcctcgagcaaacgggtttcggtcacggctcg
cctgtctacatcatccccgatttcctgaccttgctggcgcttgccgctatcaccttccgg
ttcatcaccgctccactgattttgcatttcggggagaatgaggatgagacccatggctcc
gctcgcttcgcggcagacaaggagatagcggctcttaccgcgtccggctccggcctcctg
atcggtcgtgatacgaaaacgacgaggcccctgcgctatgatggcccggcccatctcctg
acgatggcgccgacccgtaccggcaagggtgtcggcacgatcatcccaaaccagctgacc
gccgatcgttcggtgatctgcgtcgatccaaaaggcgaaaatgcaaggatcaccggccat
gcccgccagaaattcggaccggttcgtgtgctcgatccttttgctgttaccgggagacct
tctgcagccttcaatcccctggccatgcttgatccccaaaacctcgatgtcgcagaagat
gccagcgcccttgccgacgctcttgtgttcgacgaaccgggaatggcgggggaggcgcat
tggaacgaggaggcaaaagcgctgattgccgggttgctgctcgagatcgtttcggcggaa
cctttgcgacacaggcatctcgcaacgcttcgcgactatcttaccctcgctccgggacag
tttgcagcactgctgaaacatatgcaggacagcgatgcggcgagcggtcttgtcgcgcgt
gccgcaaaccgccacctcggaaaatccgaccgcgaagccgcaggcgttctgtcggccgcc
caacgccatacgcattttcttgattcaccgcgcatggcggccgtgctcagccgctctgat
ttccggttcgctgatctcaagcgcaataacatcacggtgttcctcgttcttccgcctgac
cgcctctcgacctattcgcgctggctgcgcctgcttgtcttgcaaagcctggtcgaaatg
gcccgcgatccaaccaagccggtgacaccggttctttatctgctcgatgagtttgcatcc
cttgggcatctggcgccggtcgaacgcgcgatgggtctgatggcgggttatggtgtccag
ctttggcctgtcctccaggacatccatcagctgcgggccgcatatggtcaccgcgccgga
accttcctgtcgaacgccggcgtgctgcaggtttttggcgtcaatgatcatcacagcgcc
cgtctcatctctgatttgctcggacaggaaacggtcgtgttccagacgatggcgagagcg
ctcgattccgataagaccgggatttcctatagccaacagcataccggccggccgctactc
acccctgatgaggttcgcaatctgccggggcacggacaactgctgttcctggccggacag
cggccagtttttgccgacaagcttgcctattttgccgacccggaattcagggagatgttc
gatccagtctga
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