Agrobacterium pusense IRBG74: BN877_II1694
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Entry
BN877_II1694 CDS
T02867
Symbol
rfbB
Name
(GenBank) dTDP-D-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00521
Streptomycin biosynthesis
rir00523
Polyketide sugar unit biosynthesis
rir00525
Acarbose and validamycin biosynthesis
rir00541
Biosynthesis of various nucleotide sugars
rir01100
Metabolic pathways
rir01110
Biosynthesis of secondary metabolites
rir01250
Biosynthesis of nucleotide sugars
Module
rir_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BN877_II1694 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BN877_II1694 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
BN877_II1694 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BN877_II1694 (rfbB)
00525 Acarbose and validamycin biosynthesis
BN877_II1694 (rfbB)
Enzymes [BR:
rir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BN877_II1694 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
CDI11479
UniProt:
U4Q2J6
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All DBs
Position
linear:complement(1788890..1789945)
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AA seq
351 aa
AA seq
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MRVLVTGGAGFIGSALVRYLVSEIGADVLTVDKLTYAGNLASLKPIENAPNHRFLQADIC
DRVAMNDAIATFQPDYVMHLAAESHVDRSITGAADFIQTNINGTFTMLEAARQYWSGLEG
DAKANFRMLHVSTDEVYGSLGDNGLFEETTPYDPSSPYSASKAASDHLATAWQRTYGLPV
VISNCSNNYGPFHFPEKLIPLIILNALEGKPLPVYGNGTNIRDWLYVEDHARALWLIVQK
GLAGEKYNVGGRNEQKNIDVVNCICSILDELRPQSKPYAELIKYVTDRPGHDARYAINAT
KLETELGWKAQENFATGIRKTVEWYLDNAWWWQPLREGVYSGERLGVLAKG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttcttgttaccggcggcgccggatttatcggctctgccctcgtacgttatctt
gtgagcgagattggcgcggatgttctaaccgtcgacaagctgacatatgcaggaaatctg
gcgtcccttaagccaatcgaaaatgcacccaatcatcgcttccttcaggccgacatatgt
gaccgggttgcgatgaatgacgccatcgcgacattccagccggactatgtgatgcatctt
gccgccgagagccatgtcgaccgctccataaccggcgccgctgattttatccagaccaat
atcaacggcacttttacgatgctggaggcggcacggcagtactggagcggcctggagggt
gacgccaaggccaacttccgcatgctgcatgtttcgacggacgaggtatacggctctctg
ggcgacaatggtcttttcgaagaaacgactccttacgacccgtcgtcgccatactccgcc
tcgaaagccgcaagcgatcatctcgctacggcttggcagcgcacctacggccttccggtc
gttatttccaactgctctaacaattacggtccgttccacttcccggaaaagctcattccg
ctgatcattctcaatgccttggaaggcaaaccgctgccggtttatggcaacggcacaaac
attcgcgattggctttatgtggaagaccacgcccgcgccctgtggctcatcgttcaaaag
ggcctcgctggcgagaagtacaatgtcggcggtagaaacgagcaaaagaatatcgacgtg
gtgaattgcatctgctcgattcttgacgaactacgccctcaatccaagccctatgccgag
ctcatcaaatacgtcacggatcgccctggtcacgatgcgcgctacgccataaacgccact
aaactcgaaaccgaactcggctggaaagcacaggaaaattttgcgacgggcattcgcaag
actgtagagtggtatctcgacaatgcctggtggtggcagccgcttcgagagggtgtgtac
tccggagagcgcctcggcgttctggcgaagggctga
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