Agrobacterium pusense IRBG74: BN877_II1715
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Entry
BN877_II1715 CDS
T02867
Name
(GenBank) putative DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BN877_II1715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rir03400
]
BN877_II1715
DNA repair and recombination proteins [BR:
rir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BN877_II1715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF5788
FERM_M
Motif
Other DBs
NCBI-ProteinID:
CDI11500
UniProt:
U4Q2E6
LinkDB
All DBs
Position
linear:1813661..1814488
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AA seq
275 aa
AA seq
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MTRRASWKGHLVFGDLNCEIGLYSALTSSEKISFNIVNRKTGHRVERQYVDSDTGEAVER
DEQVKGYERDNGDYIVIEGDEISKLMPENDKVIRIRHFLQCDDIDKLYFDRSYYLAPTQE
GGEEALTLLARAMEDENVAALGEAVLFRRNRVVLIRPSGRALVATTLNFGYEVRAENTVF
KSIPDIEFDDEMLELAGHIIETRAGTFDPSDYSDRYNDALAELVKAKIEGREIRKRAPQK
HDNVIDLKEALRRSAREDAGKKAKPSGRKTSRKAS
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggagggcaagctggaaaggccatttggtctttggtgatttgaattgtgaaatc
ggtctttattccgcgctcacctcgtcggagaaaatctcgttcaacatcgtcaaccgcaag
acggggcaccgcgtggagcggcaatatgtggatagtgataccggcgaggcggtcgaacgg
gacgagcaggtcaagggctacgaacgcgataatggcgattacatcgtcatcgagggtgac
gaaatctcaaagctgatgccggaaaatgacaaggtcatccgtatccggcatttcctccag
tgcgacgacatagacaagctttatttcgacaggtcctattatctagcgcccacacaggaa
ggtggcgaggaggcgctgacgcttctcgccagagcgatggaagacgaaaatgttgctgcc
ctcggagaggccgtgctgttccggcgtaaccgcgtggtcctcatccggccgagcggcagg
gcgctcgtcgcaaccacgctgaactttggttacgaggttcgggcagagaacaccgtcttc
aaatccatcccggacatcgagttcgatgacgaaatgctggaacttgccggtcatatcatc
gaaacgcgggccggcaccttcgatccctccgattatagcgaccgttacaacgatgccctt
gcggagctggtgaaagccaagattgaaggccgggaaatccgcaagcgggcgccgcagaaa
catgacaatgtgattgatctcaaggaggcgcttcgtcgcagcgcaagggaagacgctgga
aaaaaagcaaagccgtcaggccgcaagacgtcgcggaaagcgagctga
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