Agrobacterium pusense IRBG74: BN877_II1809
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Entry
BN877_II1809 CDS
T02867
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN877_II1809
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rir02000
]
BN877_II1809
Transporters [BR:
rir02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BN877_II1809
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CDI11594
UniProt:
U4Q2V0
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All DBs
Position
linear:1916221..1918170
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AA seq
649 aa
AA seq
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MRDGEAFSLGVTRRTFMAGVGGVAALSVMGASARAAAGKQAPELEALVKDGKLPPLAERL
PKNPMVVTPHEKIGTYGGTLRRGLRGSSDHNGILRMVGNQGLVRWNMDFTEVLPNLAVKW
EVNDDASQFTFHLLEGAKWSDGHPFTADDVVFAIEDCIKNKELYSATPAQLSVAGKVVDV
EKVDDFTVKFKFAAPNALYLENLATPLGQHPTLFPKHYCSKFLPKYNTALDADVKAAGVS
SWTELFRAKCGDIEIPSRWSNVDKPTLDPWVVKEPYSGGATRVVMTRNPYFWQVDTEGNQ
LPYINEINFGISQDVESLMLNVISGKIDIQERHISVLANKPTLSQNMKKGDYRLLTLVPS
AAQQCQIYLNITHKDPAMRKMFADKSFRQALSIALNRQEIIDIVYFGQSEGYQAGPRPTH
PWYNEKLARQFTEYDADKANDLLDRAGYDKKNGNGMRLRPDGQPIFFSIDVIPTLYPDLV
DALELVKAQWAQIGVDIKVNTIERALYYTRGDDNAHDAAVWPGPGGLDPMLDPRDFFAFH
PQGSRYAIPWALWYTSNGQKGEEPPESQKKRFKLFDEARSTADLAKRGEKMKQIFEIAAE
EFETIGLCLAVGGFGIIRNNLRNVPETEPDSWTWPNPGPALPQQFTFTS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatggcgaagcattttcactgggcgtaacgcgccgaacctttatggcgggtgtt
ggcggcgtggccgcactttccgtcatgggagcctcggcgcgggctgctgccggtaagcag
gcgccggaactggaggcgctggtaaaggacggcaaattgccgcccttggcggaacgcctg
ccgaaaaatccgatggtggtgacgccgcacgagaaaatcggcacctatggcggcacattg
cgccgtggcctgcgcggttcgtcggaccataacggcatcctgcgcatggtcggcaatcag
ggccttgttcgctggaacatggatttcaccgaggttctgccgaaccttgcggtgaaatgg
gaggtcaacgacgatgcctcacaattcaccttccatttgctggagggcgcaaaatggtcg
gacggccaccccttcaccgccgatgacgtggtgttcgccatcgaggactgcatcaagaac
aaggagctttacagcgccacgccggcgcagctttccgtggccggcaaggtggtcgatgtc
gaaaaagtcgacgatttcacggtaaagttcaaattcgccgcgccgaatgcgctttatctc
gaaaacctcgccacgccgctcggccagcatccgacgctgtttcccaaacactattgcagc
aagttcctgccgaaatacaacacggcgcttgatgctgatgtgaaggcggcgggcgtatcc
agctggaccgaactgttccgcgccaaatgcggggatatcgaaattccctcccgctggtcg
aatgtcgacaagccgacgcttgatccatgggtggtgaaggagccttactccggcggtgcg
acacgggtggtcatgacccgcaacccatacttctggcaggtcgataccgaaggtaaccag
ttaccctatatcaacgaaatcaatttcggcatttcgcaggatgtcgaatcgctgatgctg
aacgtcatttccggcaagatcgacattcaggagcgccatatcagcgttctcgccaacaag
ccgaccctgtcgcagaacatgaaaaagggtgactaccgcctgctgactttggtgccgtct
gccgcgcagcagtgccagatttacctgaacatcacccacaaagacccggcaatgcgcaag
atgtttgcagacaagtctttccgtcaggcattgtccattgcgctcaaccggcaggaaatc
atcgacatcgtttatttcggccaaagcgaagggtatcaggccgggccacgcccgacacat
ccctggtacaatgaaaagctggcacggcaattcaccgaatatgacgccgacaaggcgaac
gaccttctcgatagggccggttacgacaagaagaacggcaacggcatgcggcttcgtccc
gatggccagccgatcttcttctccatcgatgttatcccgacgctctatcccgatctggtc
gatgcgctagagctggtgaaggcgcaatgggcgcagatcggcgtcgacatcaaggtcaat
accatcgaacgcgcgctctattatacacgcggcgatgacaacgcccatgatgccgccgtc
tggcccggtcccggcggtctcgatccgatgctcgacccgcgcgatttcttcgccttccat
ccgcaggggtcgcgttacgccattccgtgggcgctctggtatacatccaacggccagaag
ggcgaggagccgccggaaagccagaagaagcgcttcaagcttttcgatgaggcgcgctcc
acggccgaccttgccaagcgcggcgagaagatgaagcagatcttcgaaattgcggcggaa
gagttcgaaacgatcggcctctgccttgcggtgggcggtttcggcatcatccgcaacaat
ctgcgcaacgtgccggaaacggaacccgacagctggacctggcccaatcccggcccggcg
ctgccgcaacagttcaccttcacaagctga
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