Agrobacterium pusense IRBG74: BN877_p0274
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Entry
BN877_p0274 CDS
T02867
Symbol
syrM
Name
(GenBank) HTH-type transcriptional regulator SyrM 2
KO
K25882
LysR family transcriptional regulator, transcriptional activator of nodD3 and syrA
Organism
rir
Agrobacterium pusense IRBG74
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rir03000
]
BN877_p0274 (syrM)
Transcription factors [BR:
rir03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BN877_p0274 (syrM)
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
CDI12000
UniProt:
U4QEH6
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Position
IRBL74_p:complement(214303..215316)
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AA seq
337 aa
AA seq
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MDHSVRKGSHPIIVDSDAAQQRRMPSLASIDLNLLVELEALLQYRNITHAAQHVGRSQPA
MSRALSRLRGMFNDDLLVRGSRGLVPTPQAERLAKMLPSVLKAVREMVNCSLTPRDMRWK
ATIAMPDHQALILLPRLLPRLHQYAPHLDIVTNPLLDCALRRLEQGEIDLAVGQIGAAPP
GFLRRKLYADNFTCVLRHDHPVLKQEWSIGSFAELRHASIVSNSNDRFGQVYDGLFDLGL
SDRHPIVVSNVLTAAVVIAATDLVLLVPHRVATRIAAMLPLAVVDPPVQLMPYEVALIWH
ERSHRDPEYHWLRDEIAAAARPGRNAPNTKSIREETE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggatcactccgttcggaaggggtcacatccgatcatcgttgacagtgacgccgcacag
caacggcggatgccgagcctggcatcaatcgacctgaacctgctggtggaactcgaagcg
ctattgcagtaccggaacatcacgcacgcggcccaacacgtcggccgaagccaaccggca
atgagccgagcgttgtcaaggctgcgtggcatgttcaatgacgatcttttggttcgcggc
tcgcgcggcttggtcccgacgccacaggctgaacgcctggccaaaatgctgccgtctgta
ttgaaggcggtccgcgagatggtgaattgcagcttaaccccaagagacatgcgctggaag
gcaacaatcgcgatgcccgatcaccaagcgctaattttgctaccgcgtttattgccgcgt
ctgcaccagtacgcgcctcatctcgacattgttaccaacccgctcttggactgcgcgctg
cggcggcttgagcaaggtgagatcgatttagccgtcgggcagatcggtgccgcaccgccg
ggcttcttgcggcgcaagctttacgcggacaacttcacctgcgtgctacgccacgaccac
ccagtgctaaagcaagagtggagcataggaagcttcgctgagttgcgccacgcctccatc
gtatccaactctaatgatcgcttcggtcaggtctatgacgggctgttcgacctggggcta
tcggaccgccatccgatcgtggtctccaacgtgctgacggcggctgtagtcattgcggcg
accgacctggtcctactcgtaccgcatcgcgtcgcgacccggatcgccgccatgctgccg
ctcgcggttgtagatcctcccgtgcaactgatgccatatgaggttgcgttgatctggcac
gagcgttcccatcgtgaccctgaatatcattggctccgcgacgaaatcgctgcggcagcg
cggcctggccggaacgcgccgaacaccaaatcaattagggaggagactgaatga
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