Agrobacterium pusense IRBG74: BN877_p0683
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Entry
BN877_p0683 CDS
T02867
Name
(GenBank) conserved hypothetical protein; putative Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BN877_p0683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rir03400
]
BN877_p0683
DNA repair and recombination proteins [BR:
rir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BN877_p0683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Coilin_N
Motif
Other DBs
NCBI-ProteinID:
CDI12397
UniProt:
U4Q8U1
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All DBs
Position
IRBL74_p:complement(574963..575862)
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AA seq
299 aa
AA seq
DB search
MVAPRANWKGFIKFGEVACPVALYTAASSSERIAFNTLNRRTGNRVKREFIDSETGDPVE
RDAQVKGYEIENGQYIVLEPDEVAAAVPHSDKTLKIDAFIPCSEIDSVYFDKPYYLAPDR
MGTEAFVLLRDGMKRAKVAAIARTVLFRRLRTVLIRPHGKGLIATTLNFDYEVRSSAEAF
EELPDLKIEGEMLELAAHIIGTKKGTFDASTFDDRYEAAVAELVKAKIEGRALPKKKAAA
VPRQNDLLQALRESAGMGAKSSQKRAASNANKSAGRQKASKPGAAAKSNAVSSQTRRAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggttgccccgcgagctaactggaagggctttatcaaattcggagaggtcgcgtgtcct
gtggctctctatactgcggcatcatcatctgaacggatcgctttcaacaccctcaatcgc
cgaaccggcaaccgggtgaaacgcgaattcatcgacagcgagaccggcgatcctgtggaa
cgggacgcccaggtcaagggttatgagatcgagaacggccagtatatcgttctcgagccg
gatgaggtggctgccgccgtgcctcacagcgacaagacgctgaagatcgacgccttcatc
ccctgcagcgagatcgacagcgtctatttcgacaagccgtattatctggcgcccgacagg
atggggacggaagctttcgttctgttgcgcgatggtatgaaacgagccaaagttgctgcg
atcgcccgcaccgtgctcttccgacgcctgcgtacggtgctgatcaggccacacgggaag
ggcctgatcgccacgacgctcaactttgactatgaagtccgctcgtcggcggaggccttc
gaggagttgccggacctgaagattgaaggcgagatgcttgagcttgccgcgcacattatc
ggcacaaagaaggggaccttcgacgccagcacgttcgacgaccgttatgaggccgccgtt
gccgagctggtgaaggccaagatcgagggcagggccctgccgaagaagaaggccgcagcg
gtccccaggcaaaacgaccttttgcaggcgctgcgtgagagtgctggcatgggcgccaaa
tccagccagaaacgcgccgcttctaacgccaataagagtgccggccgtcagaaggcttca
aaaccaggtgctgctgccaaatcaaatgcggtctcgtcacagacgcgccgcgccggctga
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