Rahnella inusitata: I2123_00445
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Entry
I2123_00445 CDS
T09790
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
riu
Rahnella inusitata
Pathway
riu00071
Fatty acid degradation
riu00280
Valine, leucine and isoleucine degradation
riu00310
Lysine degradation
riu00362
Benzoate degradation
riu00380
Tryptophan metabolism
riu00410
beta-Alanine metabolism
riu00640
Propanoate metabolism
riu00650
Butanoate metabolism
riu00907
Pinene, camphor and geraniol degradation
riu00930
Caprolactam degradation
riu01100
Metabolic pathways
riu01110
Biosynthesis of secondary metabolites
riu01120
Microbial metabolism in diverse environments
riu01200
Carbon metabolism
riu01212
Fatty acid metabolism
Module
riu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
I2123_00445 (fadB)
00650 Butanoate metabolism
I2123_00445 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
I2123_00445 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
I2123_00445 (fadB)
00310 Lysine degradation
I2123_00445 (fadB)
00380 Tryptophan metabolism
I2123_00445 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
I2123_00445 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
I2123_00445 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
I2123_00445 (fadB)
00930 Caprolactam degradation
I2123_00445 (fadB)
Enzymes [BR:
riu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
I2123_00445 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
I2123_00445 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
I2123_00445 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
I2123_00445 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
B12-binding_2
Motif
Other DBs
NCBI-ProteinID:
QUT15339
LinkDB
All DBs
Position
99517..101709
Genome browser
AA seq
730 aa
AA seq
DB search
MLYQGETLHLHWLDGGIAELVFDAPGSVNKLDTQTVASLGEAITVLEKQSDLKGLLLSSA
KPAFIVGADITEFLSLFNAPAKKLHEWLNFANSIFNRLEDLPVPTLSAISGYALGGGCEC
VLATDFRISTADARIGLPETSLGIMPGFGGSVRLPRLIGTDSALEIIAAGKNISGKEALK
VGLVDAVVDADKLRDAGISMLRQAVDGKLEWQKRRDPKRLPLKLSQIEAAMSFSVAKSMV
MQNAGKHYPAPMTAVKTIEAAAHLGRDEALKLETASFVPLAQSKEARALVSIFLNDQFVK
AKAKKLAHNSEKPVQAAVLGAGIMGGGIAYQSALKGVPVMMKDINDQSLTLGMNEAAKLL
NKQLERGKLDGLKMAKVLSTIHPTLDYSGIERANVVVEAVVENPKVKAAVLAEAESLLDA
DTVLASNTSTIPIDQLASSLKRPENFCGMHFFNPVHRMPLVEIVRGAKTSDKTLSRIVSY
ALTMGKTPIVVNDCPGFFVNRVLFPYFSGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMARDYRDAVDVLFDNRRFGQKNQLGFYRYSEDSKGKP
RKEVDEQVLSLLAENLKPGHADFSPQDIIARMMIPMINEVVRCFEEGIIASPAEADMALV
YGIGFPPFHGGPFRYLDTIGTAEYLKMTEHYAHLGPMYQAPDGLRTKAQTNESYYPVAAP
LENISTGNQA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctttaccaaggcgaaacattacacctgcactggctcgacggcggtatcgcggagctg
gtgttcgacgctccgggctcggtgaataagctcgatactcaaacggtcgccagcttaggc
gaggcgattacggtactcgaaaagcagtctgacctgaaagggttgctgcttagctcagcc
aaaccggccttcatagtcggtgcggacatcactgaatttttgtccctgtttaacgcgcca
gcgaagaaactgcatgagtggctgaatttcgccaacagcattttcaaccgactggaagat
ttaccggtgccgacgctttctgccatcagcggttatgcgctgggcggcggctgcgagtgc
gtactggctaccgattttcgtatcagcactgccgatgcacgcattggtttgccggaaacc
agtttagggattatgccgggcttcggcggttccgttcgcctgccgcgcctgattggtacc
gacagcgccctggaaattatcgccgcgggtaaaaacatcagcgggaaagaagccctgaaa
gtcgggctggtcgatgcggtggttgatgccgataagctgcgcgacgccgggatctccatg
ctcagacaggcggttgacggcaaactggaatggcaaaaacgccgtgacccgaaacgcctg
ccgctcaaactcagccagatcgaagcggcgatgagtttcagcgtggcgaaaagcatggtc
atgcagaatgccggcaaacactatccggcaccgatgaccgcagtcaaaaccattgaagcc
gccgcgcatcttggccgcgacgaagcactcaaactggaaaccgccagctttgtgcccctc
gcacaatccaaagaagcgcgggcgctggtcagcattttccttaacgatcagttcgtcaaa
gccaaagctaaaaaactggcgcataacagcgaaaaaccggtgcaggccgccgtgcttggc
gcaggcattatgggcggcgggatcgcttaccagtccgcgctgaaaggtgtaccggtcatg
atgaaagacatcaatgaccagtccctgacgcttggcatgaacgaagcggccaagttgctc
aacaagcaactcgagcgcggaaagctcgatggactgaagatggcgaaagtgctgtcgacc
attcatccgacgctggattacagcggtatcgaacgcgccaacgtggtggtcgaagcggtt
gtggaaaatccaaaagtgaaagccgcagtgctggccgaggccgaatcgttactcgacgcc
gataccgttctggcctccaacacatcaactattcctatcgatcagctggcttcctcgctg
aaacgcccggaaaacttctgcggcatgcacttcttcaacccggtgcatcgtatgccgctg
gtggaaattgttcgtggcgcgaaaacctcagataaaacattgtcgcgcatcgtctcttac
gcactgaccatgggcaaaacgccgattgtggtcaacgactgcccgggattcttcgtcaac
cgcgtcctgttcccgtacttctccggctttagtttactgctgcgtgacggcgcagatttc
cgccagatagacaaagtgatggaaaaacagttcggctggccgatgggcccggcatatctg
ctggatgtggtcggtatcgataccgcgcatcatgcgcaggcggtcatggcggccggattc
ccgcagcgtatggcgcgagactatcgtgacgccgtggacgtgttgttcgataaccgccgc
tttggccaaaaaaatcagctgggcttctaccgttacagcgaagacagcaaaggtaaaccg
cgtaaagaggtggatgaacaggtgctcagcctgctggctgaaaatctcaaaccgggccac
gctgacttctcaccgcaggatatcatcgcccgtatgatgatcccgatgattaacgaagtg
gtgcgctgcttcgaggaaggcattattgccagcccggcagaagctgatatggcactggtg
tacggcatcggtttccctccgttccacggcggcccgttccgttatctcgatacgattggc
acggcggaatatctcaaaatgaccgaacattacgcgcacctggggccgatgtatcaggca
ccggacgggcttcgcaccaaagcgcaaaccaatgaaagttactacccggttgcggctccg
ctggaaaacatcagcaccggtaatcaggcataa
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