Rahnella inusitata: I2123_00665
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Entry
I2123_00665 CDS
T09790
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
riu03021
]
I2123_00665 (rpoH)
Transcription machinery [BR:
riu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I2123_00665 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
SANT_DAMP1_like
UCR_14kD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QUT15381
LinkDB
All DBs
Position
complement(148776..149633)
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AA seq
285 aa
AA seq
DB search
MTKEMRALALVPQGSLEAYVRAANAYPMLTAEEERALAERLHYDGDLEAAKHLILSHLRF
VAHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKNKQRLGWFSHDEVEHVARELGVTSKDVLEMESRMAAQDM
TFDPTPDDEPRDGAAMAPMLYLQDKSSDFAESIEEDNWDRDATDKLSSAMEGLDERSQDI
IRARWLDDDNKSTLQELADKYGVSAERVRQLEKNAMKKLRVAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcgcgctttagcattagtaccccaaggtagcctggaagcctatgtt
cgggcggccaatgcctatcctatgctcaccgcagaggaagaacgggcgctggctgaacgg
ctgcattacgacggtgacctggaagcggctaaacacctgatcctgtctcacctgcgcttt
gttgctcacattgcccgcaactattcaggttacggtttgccacaggcagaccttatccag
gaaggtaacatcggcctgatgaaagcggttcgccgttttaatccggaagtcggtgtgcgt
ctggtgtcctttgcggtgcactggatcaaagcagagattcacgaatatgtgctgcgtaac
tggcgcatcgtgaaagtcgcgactacgaaagcacagcgtaagctgttctttaatctgcgc
aaaaacaaacagcgtttgggctggttcagccacgacgaagtggagcacgttgcccgcgaa
ttgggtgtgaccagcaaagatgtgctggaaatggaatcgcgcatggccgcacaggacatg
acgttcgacccaacgccggatgatgaaccacgcgacggcgcggcgatggcgccgatgctg
tatctgcaagacaagagttctgacttcgcagaaagcatcgaagaagataactgggatcgt
gacgcgacagacaaactctcttccgcgatggaaggtctggacgaacgtagccaggatatc
attcgtgcgcgctggctggatgacgacaataaatccactctgcaggaactggccgataag
tacggcgtttcagcagaacgtgttcgtcagctggaaaagaacgcgatgaagaaactgcgc
gtggcgatcgaagcctga
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