Rahnella inusitata: I2123_00750
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Entry
I2123_00750 CDS
T09790
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
riu
Rahnella inusitata
Pathway
riu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I2123_00750 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
riu03019
]
I2123_00750 (recQ)
03400 DNA repair and recombination proteins [BR:
riu03400
]
I2123_00750 (recQ)
Enzymes [BR:
riu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I2123_00750 (recQ)
Messenger RNA biogenesis [BR:
riu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I2123_00750 (recQ)
DNA repair and recombination proteins [BR:
riu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I2123_00750 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QUT15398
LinkDB
All DBs
Position
complement(164911..166743)
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AA seq
610 aa
AA seq
DB search
MSTAAVINKEELAHQVLRDTFGYQQFRPGQQTIINTAISGRDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLMAAGVEAGCLNSTQTREQQQEVMAGCRTGRIKMLY
IAPERLMLGDFLEQLQQWNPAMLAVDEAHCISQWGHDFRPEYRALGQLKLRYPQLPVIAL
TATADEATRNDIVRLLELNDPLIQVSSFDRPNIRYTLVEKFKPLDQLIRFVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQ
QDVERHKLNAMNAFAEAQTCRRLVLLNYFGEGKQNACGNCDVCLDPPKRYDGLLDAQKAL
SVVARVGQRFGLGYVVEVLRGSNNQRIREYGHEKLSVYGIGKEHSNEHWTSVVRQLIHLG
LIMQNIAMHSALQLTEAARPVLRGEIPLQLAVPRIQTLKIKSPSRQKAYGGNYDHKLFAK
LRKLRKSLADDNNVPPYVVFNDTTLLEMAEHLPISPSDLLDITGVGQRKLEKFGRPFMAM
IRDHIDNGDD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcggcagtgataaataaagaagagctggctcatcaggtattacgcgatacc
ttcggctatcagcaattcagaccgggtcagcaaacgatcatcaataccgccatttctggc
cgggattgtctggtggtgatgccgaccggcggcggtaagtcgctgtgctatcaaatccct
gcgctggtgatggacggcctgacgctggtggtttcaccgctcatctccctgatgaaagat
caggtcgaccaactgatggcggcgggtgttgaagccggctgcctgaactcgacccaaacc
cgcgagcaacagcaggaagtgatggcaggctgccgtaccggccgcatcaaaatgctgtat
atcgcgccggaacgtctgatgctgggggatttcctcgagcagttgcaacagtggaatccg
gcgatgcttgccgtcgatgaagcccactgtatttcccaatggggacacgatttccgacca
gaataccgggcactcggccagctcaaactgcgttatccgcaactgccggtgatcgcgctg
acggcgaccgctgatgaagcgacccgcaacgacatcgtccgtctgctggagcttaacgat
ccgctgattcaggtcagcagtttcgatcgtcccaatatccgttacacgctggtggagaag
tttaaaccgctcgatcagctgattcgcttcgtgcaagaccagcgcggcaaaagcggcatt
atttattgcaacagccgcgccaaagtcgaagacaccgccgcgcgcctgcaaagccgtggt
ctgagcgtgggtgcttatcacgccggtctggacaacgatacccgcgcccgcgtgcaggaa
ggtttccagcgcgatgatttgcaaattgtggtcgccaccgtggcgttcggcatgggcatc
aacaagcccaacgtgcgtttcgtggttcactttgatattccgcgcaccatcgagtcttac
tatcaggaaacgggccgtgccgggcgtgatggcctgcctgccgaagcggtgctgttgtac
gatccggccgatatggcatggctgcgccgctgtctggaagaaaagccggccggtgcgcaa
caggatgtcgaacgtcacaaactgaatgcgatgaacgcttttgcggaagcgcaaacctgc
cgccgtctggtgttgttgaattacttcggcgaaggcaaacagaacgcctgcggtaactgc
gacgtttgtcttgatccgccaaaacgctacgacggcctgctggacgcgcaaaaagcgctg
tcagtggtcgcacgcgtcggacaacgctttggtttaggttacgtggtcgaagtgctgcgc
ggctcgaataatcagcgcatccgcgaatacgggcatgaaaaactgagcgtctacggcatc
ggtaaagaacacagcaacgaacactggaccagcgtggtacgccagctgatccacctcggg
ctgattatgcaaaatatcgccatgcattcggcattacagttgaccgaagcggcgcgtccg
gtactgcgcggagaaatccctttgcagctggcggtaccgcgtattcagacgctgaagatt
aaaagcccgtcccgccagaaagcttatggcggcaattacgatcacaagctgtttgccaaa
ctgcgcaagctgcgtaagtcgctggccgatgacaataatgtgccaccgtacgtggtgttt
aacgacacaacgctgctggaaatggctgaacatctgccgataagcccaagcgatttgctg
gatatcaccggcgtcggccagcgcaagctggaaaaattcgggcgaccgtttatggcgatg
atccgcgatcacatcgataacggcgacgactaa
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