Rahnella inusitata: I2123_00800
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Entry
I2123_00800 CDS
T09790
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
riu
Rahnella inusitata
Pathway
riu00300
Lysine biosynthesis
riu00470
D-Amino acid metabolism
riu01100
Metabolic pathways
riu01110
Biosynthesis of secondary metabolites
riu01120
Microbial metabolism in diverse environments
riu01230
Biosynthesis of amino acids
Module
riu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I2123_00800 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I2123_00800 (dapF)
Enzymes [BR:
riu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
I2123_00800 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QUT15408
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Position
complement(176135..176959)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHRGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRIKGLTNKRDIRVSTQTGRMTLTVTEDEDVQVNMGE
PVFEPQQVPFRAAKPEKTYILRAEERTVFCGVVSMGNPHCVLQVEDVLTAEVDILGPILE
SHERFPERVNVGFMQIVSPDTIKLRVYERGAGETQACGSGACAAVAIGIQQGLLAEEVQV
ELPGGSLEIRWQGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctgggcaacgactttatggttgttgacgccgttact
caaaatgtctatttctcccctgagttgatccgccgtttgtccgatcgccatcgtggcgtg
ggttttgaccagctgctggtggtagagccaccttacgatcctgagttagactttcattac
cgtatcttcaacgccgacggcagtgaagttgcgcagtgcggcaacggcgcgcgctgtttt
gcccgttttgtccgtatcaaagggctgaccaacaaacgcgatatccgcgtcagtacgcag
acaggtcgcatgacgctgacggtcaccgaagatgaagatgttcaggtgaacatgggcgag
ccggtctttgaaccgcagcaggtacctttccgtgccgcgaaaccggaaaagacctatatt
ctgcgcgccgaagagcgcacagtattttgcggtgtggtttcaatgggcaatccgcattgc
gtgttgcaggttgaagacgtgctgacggccgaagtcgatattctcgggccgatcctcgaa
agccatgaacgtttccctgagcgcgtgaacgtcggtttcatgcagatagtcagcccggat
accatcaagttacgtgtttacgagcgcggcgctggcgaaacacaggcgtgcggaagcggc
gcatgtgctgcggtggccattgggattcagcaaggattactcgcagaagaagtacaggtg
gaactgccgggaggcagcctcgaaattcgctggcaagggccgggtcatccgctgtatatg
accggacctgccactcatgtttacgacggatttattcatctatga
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