Rahnella inusitata: I2123_01160
Help
Entry
I2123_01160 CDS
T09790
Symbol
cytR
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
riu03000
]
I2123_01160 (cytR)
Transcription factors [BR:
riu03000
]
Prokaryotic type
Helix-turn-helix
LacI family
I2123_01160 (cytR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_Tnp_ISL3
MarR_2
TetR_N
HTH_Crp_2
AIRS
HTH_24
HTH_91
HTH_10
HTH_IclR
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
QUT17285
LinkDB
All DBs
Position
259072..260100
Genome browser
AA seq
342 aa
AA seq
DB search
MEHKKELPAATMKDVAEQAGVSTATVSRALMNPEKVSASTRQKVDQAVMAVGYSPHAMSR
NLKRNESRTILVIVPDICDPFFADLIQGIEHTAAKSGYLVLIGDCAHQNQQEKTFINLII
TKQIDGMLLLGSDLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLL
KLGHQRIACIAGPKHMPLCQYRSQGYVQALRRNGISVESALTVHGDFSYESGAQAVIELM
SLPTPPTAIFCHNDVMAIGAMFQAKKMGLKIPKDLSIVGFDDIKASQFTDPPLTTVAQPR
FQLGRQAMLLLLEQLQGNPGENGSLLLDSELIVRESTAAPKA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggagcacaagaaagaattacccgccgcgacaatgaaagatgtggctgaacaggcaggc
gtttcaacagcaacggtatcccgcgcgttaatgaatccggaaaaagtctccgcttccacc
cgtcagaaagtggatcaggcggtcatggccgtgggctattcgcctcatgccatgtcacgc
aatttaaaacgcaacgaatcccgcacgattctggtgatcgtcccggatatctgcgatccg
tttttcgccgatctgatccaggggatcgagcatacggcggcgaaaagtggctatctggtg
ctgatcggcgattgtgctcatcagaaccagcaggaaaaaaccttcatcaatctgatcatc
accaaacaaattgacggcatgcttctgctcggctccgatttaccgttcgacgccagcaaa
gaagaacagcgtaatctgccgccaatggtgatggccaacgaatttgcgccggaacttgag
ctgccgaccgttcatatcgacaacctgaccgccgcctttgaagccgtgcattatttgctt
aagctcgggcatcagcgtattgcctgcattgccggcccgaaacacatgccgctgtgccag
tatcgttctcagggctacgttcaggcgctgcgccgtaacggcatcagcgtcgaaagcgcg
ctcaccgtgcatggtgattttagctatgaatcaggcgcacaggcggttattgagctgatg
tctctgccgacgccgccgacggcgattttctgccataacgacgtgatggcgattggcgcg
atgttccaggcgaagaaaatgggtctgaagattccgaaagatctgtcgattgtcggcttc
gatgacatcaaagccagtcagttcaccgaccctccgctgaccaccgtggcgcagcctcga
ttccagcttggtcgtcaggccatgttattattacttgaacagttacaagggaatccggga
gaaaacggttcactgctgctcgacagcgagctcatcgttcgtgaaagtacagcggcaccc
aaagcgtga
DBGET
integrated database retrieval system
