Rahnella inusitata: I2123_01325
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Entry
I2123_01325 CDS
T09790
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
riu
Rahnella inusitata
Pathway
riu00541
Biosynthesis of various nucleotide sugars
riu01100
Metabolic pathways
riu01250
Biosynthesis of nucleotide sugars
Module
riu_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
I2123_01325 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
riu01005
]
I2123_01325 (rfaD)
Enzymes [BR:
riu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
I2123_01325 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
riu01005
]
Core region
I2123_01325 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
QUT15500
LinkDB
All DBs
Position
291809..292741
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIIKSLNDMGYRDILVVDNLKDGTKFVNLVDLDIADYCDKEDFIASI
VAGDDLGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKDILHFCLDRSIPFLYASSAATY
GSQSTSFVEERQYEQPLNVYGYSKFLFDQYVREILPHAESQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINAGENPKLFSGSEGFKRDFIYVGDVAAVNLWFWQNGVSGIFNCGTGRS
ESFQAVADAVVAYHKSGDIEYIPFPEKLKGRYQSFTQADMTALRKAGYDKPFKTVAEGVT
EYMSWLNRTV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgataatcgtcactggcggcgctggttttatcggcagcaatattattaaatcgctcaat
gatatgggatatcgcgatattttagtggtcgataacctgaaagacggcaccaaattcgtc
aatctggtcgatctggatattgcggattactgcgataaagaagacttcatcgccagcatc
gttgccggcgatgatctgggtgatatcgacgcaatcttccatgaaggcgcgtgctcgtcc
accacggagtgggacggcaaatacatgatggataacaactatcagtattcgaaagatatc
ctgcatttctgtctcgaccgtagcattcctttcctgtacgcctcttccgctgcgacctac
ggcagccagagcaccagctttgttgaagaacgtcagtacgagcaaccgctgaacgtgtac
ggttactctaagttcctgtttgaccagtatgttcgtgaaattttgccgcacgctgaatct
cagatctgcggtttccgctacttcaacgtttatggcccacgtgaaggtcataaaggcagc
atggccagcgttgcattccatctgaataaccaaatcaacgccggtgagaatcctaaattg
ttctctggcagcgaagggtttaaacgtgatttcatctatgtaggtgatgtggcggcggta
aacctgtggttctggcagaacggcgtttccggtattttcaactgcggcaccggccgttca
gaatctttccaggctgtagcggatgccgtcgtggcctatcacaaatcgggcgatatcgaa
tacattcccttcccggaaaaactgaaaggtcgttaccagtctttcacgcaggctgatatg
acggctctgcgtaaagcgggttatgacaagccgttcaaaacggttgccgaaggtgtgacg
gaatacatgagctggctcaaccgcacagtctaa
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