Rahnella inusitata: I2123_01780
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Entry
I2123_01780 CDS
T09790
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
riu
Rahnella inusitata
Pathway
riu03030
DNA replication
riu03410
Base excision repair
riu03420
Nucleotide excision repair
riu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I2123_01780 (polA)
03410 Base excision repair
I2123_01780 (polA)
03420 Nucleotide excision repair
I2123_01780 (polA)
03440 Homologous recombination
I2123_01780 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
riu03032
]
I2123_01780 (polA)
03400 DNA repair and recombination proteins [BR:
riu03400
]
I2123_01780 (polA)
Enzymes [BR:
riu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I2123_01780 (polA)
DNA replication proteins [BR:
riu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I2123_01780 (polA)
DNA repair and recombination proteins [BR:
riu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I2123_01780 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I2123_01780 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QUT15584
LinkDB
All DBs
Position
complement(378690..381494)
Genome browser
AA seq
934 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSQGEPTGAMYGVLNMLRSLLLQYTPSHVAV
VFDAKGKTFRDELFDQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTPGVTLINTMNNAILGPDEVVEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYADLDKISTLSFRGSKTMAAKLADNK
DVAYLSYQLATIKTDVKLDVTCAELTVSEPDADELHQLFGRYEFKRWLTDVESGTWLSGK
KSAAKVTSSAKKGSLAADMPAAEPVERNQLTQDGYVTILDQDTLDQWIGYLKASEVFAFD
TETDGLDTLTANLIGLSFATEAGKAAYLPVAHDYLDAPTQLDRTDVLKQLKPLLEDEKQL
KVGQNLKFDRGILLRYDIEMKGIAFDTMLESYVLDSVSGRHDMDSLADRYLGHKTVGFEE
IAGKGKNQLTFNQIALEQAAPYAAEDADVTLQLHQTLWPRIQESESLKKVFTDIEMPLVP
VLSHIERTGVLIDQHILAAHSKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYEKQK
LPILKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPQSGRV
HTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKDYCILAADYSQIELRIMA
HLSKDEGLLKAFAEGKDIHRATAAEVFGTPLESVTGEQRRSAKAINFGLIYGMSAFGLSR
QLNIPRKESQRYMDLYFERYPGVLQYMERTRTQASEQGYVETLDGRRLYLPDIKSSNAMR
RKGAERAAINAPMQGTAADIIKRAMIKVADWLKQPDAPRARIIMQVHDELVFEVHNDDVE
AASEKIRDLMESSMELAVPLKVDVGTGENWDQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatagcagaaaacccattgatcctggtagacggttcgtcctacctctaccgc
gcttaccatgcgtttcccccgttgaccaactcccagggtgaaccgacgggcgcgatgtac
ggcgtgctgaacatgttgcgcagtttgttgctgcaatacacgccgagccatgttgctgtg
gtgtttgacgcgaaaggcaaaaccttccgtgatgaactctttgatcagtacaaatctcac
cgtcccccaatgcctgacgatctgcgttcgcaaattgaacccctgcatcagatggtgaaa
gcgatgggattaccgttgctggtggtgtcaggcgtagaagcggacgacgtgattggcaca
ctggcactcgaagctgagaaggcgggtcatgccgtgctgataagtaccggcgacaaagac
atggcgcagctggtcacgccgggtgtgacgctgattaacaccatgaacaacgcgatcctc
gggcctgatgaagtcgttgaaaaatatggcgtgcccccggaactgattatcgattttctg
gccctgatgggtgattcctcggacaacattccgggtgtgccgggcgttggcgaaaaaact
gcgcaggcactattacaggggattggtggactcgatgcgttgtatgccgaccttgataag
atttctacattaagcttccgtggttctaaaactatggcggcgaaactggctgataataaa
gacgttgcttacctctcttaccagctggcaacgatcaaaactgacgtcaaactggatgtg
acttgtgccgagctgacagtctccgaaccggacgccgatgaacttcatcagctgtttggc
cgttatgagttcaagcgctggctgaccgatgttgaatccggcacctggctgagcggtaaa
aaatcagctgcaaaagtgacatcttctgccaagaaaggctcactcgctgcagatatgcct
gcggctgaacccgtcgagcgtaatcagcttactcaggacggttacgtcactattctcgat
caggacacgcttgatcagtggatcggctacctgaaagcctctgaagttttcgcattcgat
actgaaaccgatggcctggatactctgacggctaatctgattgggttatctttcgcgact
gaagcgggtaaagcggcttatcttcccgtcgcgcatgattatctggatgcaccgacgcag
ctggatcgcactgatgtactgaaacaactcaagcctttgctggaagatgagaagcagttg
aaagtcggacaaaacctgaaattcgatcgcggcatcctgctgcgctatgacatcgaaatg
aaaggaattgcgtttgataccatgctcgaatcttacgtgctcgacagtgtctcaggtcgt
catgatatggacagcctggcagaccgttatctgggccataaaacggtcggttttgaagaa
atcgccggcaaaggtaaaaaccagctgactttcaaccagatcgcgcttgaacaggctgcg
ccgtatgcagcggaagatgccgatgtcacgctacaactgcatcagactctctggccgcgt
attcaggaaagcgaatcactgaagaaagtattcaccgatatcgaaatgccgctggtgccg
gttctgtctcacattgagcgtactggtgtcctgatagaccagcatattttagctgcgcat
tccaaagaactggccatccgcctgaatgaactggaaaacaaagcgcatgagctggcggaa
gaaccttttaacctgtcgtcgactaagcagttgcaggccattttgtatgaaaaacaaaag
ctgccgatactgaagaaaacgccgggtggagcaccttcaacaaatgaagaggtgctggct
gaactggcgctggattatccactgccgaaagtcattctggagtatcgcggtctggcgaag
ctgaaatcgacgtacaccgacaaactgccgttgatgatcaatccgcagtctggccgcgtg
cacacgtcttatcatcaggctgtcacagcgaccggacgcctgtcatccagtgatccaaac
ttgcaaaacattccggtgcgtaacgatgaaggccgtcgcatccgtcaggcttttattgca
ccgaaagattactgcattctggctgctgactactcgcaaatcgaattgcgcatcatggcg
catttatcgaaagatgaggggctgctgaaagcctttgcggaaggtaaagatattcaccgg
gctacagcggctgaagtctttggcacaccgctggagagcgtcaccggcgagcagcgccgt
agtgcgaaggccatcaacttcggcctgatttacggcatgagcgcatttggtctttcgcgc
cagttgaacattccgcgtaaagaatcccagcgttatatggatctctattttgaacgctat
ccgggcgttctccaatatatggaacgcacgcggacgcaggcttctgaacaaggctatgtt
gaaacgcttgacggtcgccgcttgtatctgccggatattaaatccagcaacgccatgcgt
cgtaagggtgccgagcgcgccgcaatcaatgccccaatgcagggaacggctgctgacatc
atcaagcgagcgatgataaaggtcgcggactggctgaaacaaccagatgccccgcgtgcc
cgcatcattatgcaagtacacgatgaattggtttttgaggttcataatgacgacgttgag
gccgcaagtgagaaaatccgcgatctgatggaatcaagcatggaactggccgttccgttg
aaagtggatgtaggtactggcgagaattgggatcaggctcactaa
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