Rahnella inusitata: I2123_03055
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Entry
I2123_03055 CDS
T09790
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
riu03000
]
I2123_03055
Transcription factors [BR:
riu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I2123_03055
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_23
HTH_29
HTH_8
HTH_28
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QUT15821
LinkDB
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Position
complement(669544..670464)
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AA seq
306 aa
AA seq
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MIDSEITFRKLEIFLAYMEKQNISRAAEQLGLSSVSVHRALHSLEEGLRCPLFIHKGRNL
LPLPAAEALLEHATQVIEQMEHGIQATQRAAGFGDKSLKLGTLYSLTLETIPRLIMGLKL
RRPELELELVMGSNNDLLHKLEDGQLDAILISTSDSSIDAQRYDQLPLFQDDIFLAAPAS
SEMATEGTADLRDFKQEKFVSLAEGFATYHGFQEAFQIAGFEPDIVTRVNDIFSMLSLVQ
AGVGYTLIPGRMKGVYENTVRLLPLAEAYQMRQTIALVFPHSREHDPNLLALAAESRMYA
LASRKR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacagtgaaatcactttccgcaaactcgaaattttcctcgcctacatggaaaag
cagaacatcagccgcgccgccgaacagctcggactgagcagcgtcagcgtgcatcgtgcg
ctacattctctggaagaagggttgcgctgtccgctgttcatccacaaaggccgcaacctg
ttaccactgcccgccgccgaagcgttgctggaacacgccacgcaggtcatcgaacagatg
gaacacggcattcaggccacccagcgcgccgccggatttggcgacaaaagcctgaagctc
ggcacgctgtattccctgacgctggaaaccattccgcgcctcatcatggggctgaaactg
cgccgtccggaacttgagctggaactggtgatgggctcgaacaatgatttgctgcacaag
ctggaagacggccagctcgatgccatcctgatttccaccagcgactccagtatcgacgcc
caacgttacgatcagctgccgctttttcaggatgatattttcctcgccgcgcctgccagt
tcagaaatggcaaccgagggcacggcggatttgcgggatttcaaacaggaaaaattcgtc
tcactggccgaaggattcgcgacttaccacgggtttcaggaagcatttcagattgccgga
tttgagccggatattgtgacgcgggtaaatgacattttctcaatgctgagtctggtgcag
gcgggcgtcggctatacgctgatccctggccggatgaagggagtgtatgaaaatacggta
cgtttactgccgctggccgaagcctatcagatgcgtcagaccatcgcgctggtgttcccg
cacagccgcgagcacgacccgaacctgctcgccctcgcagccgaaagccggatgtatgcg
ctggcgagccgcaagcgctga
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