Rahnella inusitata: I2123_03660
Help
Entry
I2123_03660 CDS
T09790
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
riu03009
]
I2123_03660 (rsmB)
Enzymes [BR:
riu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
I2123_03660 (rsmB)
Ribosome biogenesis [BR:
riu03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
I2123_03660 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
FtsJ
MTS
Methyltransf_37
Methyltransf_5
Methyltransf_4
Methyltransf_15
Cons_hypoth95
Methyltr_RsmF_N
Methyltransf_12
Methyltransf_11
Methyltransf_33
Ubie_methyltran
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QUT15937
LinkDB
All DBs
Position
complement(790807..792096)
Genome browser
AA seq
429 aa
AA seq
DB search
MKTAYNLRSIAAQAISQVLDKGLSLSTVLPGLQKNISDKDRGLLQELCFGTLRVLPQLEW
CLQQLMAKPLTGKQRTLHYLLMVGLYQLIHTRIPAHAILAETVEGAVALKRPQLKGLVNG
VLRQFQRQQEELLPRMSNNDSRHLHPSWLLKRLKKAYPTEWENIVDANNQRPPMWLRVNR
LHHTRDQYLNLLNEAQIEAVPHAEYRDALRLVTPCQVNLLPGFAEGWVTVQDASAQGSVD
LLDPQDGEMILDLCCAPGGKTTHILEAAPKAQVLAVDVDEQRLKRVHENLQRLKLSAEVK
QGDGREPQSWAGDRIFDRILLDAPCSATGVIRRHPDIKWLRRDSDIAELAMLQKEILEAV
WPRLKSQGVMVYATCSILPDENSEQITAFLETHPDATLVETGTAEKPGRQNLPHAEDGDG
FYYAKLIKS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagcctataatctccgaagtattgcagctcaagctattagccaggtgttagac
aaaggtttgtcactttctactgttctgcccggtttacagaaaaatatctcagataaagac
cgcgggttactacaagaactctgtttcggcacgctccgggtattgcctcaactcgaatgg
tgtttgcagcaactgatggcgaaaccactcaccggcaaacagcgaaccctgcattatttg
ctcatggttggcttatatcagctaatacatacacgcattcccgcccatgccatcttggcg
gagaccgttgagggtgcagttgctcttaaacggccgcaactcaagggcctggtcaacggt
gtcctgcgtcagttccagcggcagcaggaagaactacttccgcgaatgtccaacaacgac
agccgccatcttcacccgagctggttgctaaaacgtctgaaaaaagcctatcccacagaa
tgggagaatatcgttgatgccaataaccaaaggcctccgatgtggctgcgtgtcaatcgt
ctgcatcatacccgtgatcaatatttgaatttattgaatgaagcacagattgaggcggtt
ccccatgcagaatatcgcgatgcgttacgtctcgtgacaccttgtcaggtaaatctgctt
ccgggattcgcagagggatgggtaaccgttcaggatgcgtcggcacaaggcagcgttgat
ctgctggatcctcaagatggcgagatgatcctcgatttgtgttgcgcaccgggcggaaaa
accacgcatatcttggaagctgcgccgaaagcacaagtgttagctgtagatgtggatgag
caacgccttaaacgcgttcatgagaatcttcagcgtctgaaactcagtgcggaagtcaaa
cagggtgatggccgcgagccgcagagttgggcgggtgaccgcatcttcgatcgtatcctg
ctcgatgcaccttgttcggcaaccggcgttattcgtcggcatcctgatattaaatggctg
cgccgtgatagtgatattgctgaactggccatgttgcagaaagaaatcctggaggccgtt
tggccacgcctgaaaagccagggtgtgatggtatatgcaacctgttccattctgcctgac
gaaaacagtgaacaaattactgcatttttagagacgcatcctgacgcgacgctggtcgaa
acaggtacagcggaaaagccaggccgacaaaatcttccgcacgctgaagatggcgacggt
ttctattacgctaaactgattaaaagttaa
DBGET
integrated database retrieval system
