Rahnella inusitata: I2123_04080
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Entry
I2123_04080 CDS
T09790
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
riu
Rahnella inusitata
Pathway
riu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I2123_04080 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
riu03019
]
I2123_04080 (groL)
03110 Chaperones and folding catalysts [BR:
riu03110
]
I2123_04080 (groL)
03029 Mitochondrial biogenesis [BR:
riu03029
]
I2123_04080 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
riu04147
]
I2123_04080 (groL)
Enzymes [BR:
riu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
I2123_04080 (groL)
Messenger RNA biogenesis [BR:
riu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
I2123_04080 (groL)
Chaperones and folding catalysts [BR:
riu03110
]
Heat shock proteins
HSP60 / Chaperonin
I2123_04080 (groL)
Mitochondrial biogenesis [BR:
riu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
I2123_04080 (groL)
Exosome [BR:
riu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
I2123_04080 (groL)
Exosomal proteins of other body fluids (saliva and urine)
I2123_04080 (groL)
Exosomal proteins of breast cancer cells
I2123_04080 (groL)
Exosomal proteins of colorectal cancer cells
I2123_04080 (groL)
Exosomal proteins of bladder cancer cells
I2123_04080 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QUT16007
LinkDB
All DBs
Position
873181..874827
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGNDARVKMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVIHAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKATLEDMGQAKRVVINKDTTIIIDGVGEEATIQGRVSQIRQQIEEATSDY
DREKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVAHTLAGLKGDNEDQNVGIRVALRAMESPLRQIVVNAGEEASVIANKVKAGEGSFGYNA
YTEEYGDMIAMGILDPTKVTRSALQYASSVAGLMITTECMITDLPKDDKGDMGGAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttaaattcggtaatgacgcccgtgtgaaaatgctgcgtggcgta
aacatccttgctgatgcagtaaaagtgaccctgggccctaaaggccgcaacgtggttttg
gacaaatctttcggcgctccaaccatcactaaagatggtgtgtccgttgcacgtgaaatc
gaactggaagataagttcgaaaacatgggtgcacagatggtgaaagaagtcgcgtccaaa
gcgaacgatgcagcgggtgacggtaccactaccgcaaccgttctggcacaagccatcatc
accgagggtctgaaagccgttgccgctggcatgaacccaatggatctgaaacgcgggatc
gacaaagctgttatccacgccgttgaagaactgaaaaaactgtctgtcccttgctctgat
tctaaagcgattgcacaggtaggtaccatctctgctaactccgatgaaaccgtcggtaaa
ctgatcgcagaagcgatggaaaaagtcggcaaagaaggcgtcatcactgttgaagaaggc
accggtctgcaagacgagctggacgttgtagaaggtatgcagttcgaccgcggttacctg
tctccgtacttcatcaacaaaccagaaaccggttcaatcgaactggaaagcccgttcatt
ctgctggctgacaaaaagatttctaacatccgcgaaatgctgccagtactggaagccgtt
gcgaaagcgggcaaaccactgctgatcattgctgaagacgttgaaggcgaagccctggcg
actctggttgtgaacaccatgcgtggcatcgtgaaagtcgctgcggttaaagcacctggt
ttcggtgaccgtcgtaaagcgatgttgcaggatatcgcaaccctgactggcggtaccgtt
atctctgaagagatcggtctggagctggaaaaagcgactctggaagacatgggtcaggct
aagcgtgttgttatcaacaaagacaccaccatcatcatcgacggtgttggcgaagaagcg
accattcagggccgtgtttcccagattcgtcagcaaatcgaagaagcgacctctgattac
gatcgcgaaaaactgcaagagcgtgtggctaaactggcaggcggcgtagccgttctgaaa
gttggcgcagcaactgaagttgaaatgaaagagaagaaagcccgcgtcgaagatgcgttg
cacgcaacccgtgctgccgttgaagaaggcgtggttgctggtggtggtgttgcgctgatc
cgcgttgctcacactctggctggcctgaaaggcgacaacgaagaccagaacgtgggtatc
cgtgttgctctgcgcgcgatggaatctccactgcgtcagatcgtggttaacgccggtgaa
gaagcctccgttatcgcgaacaaagtcaaagcgggcgaaggcagcttcggctacaacgct
tataccgaagaatacggcgacatgatcgcaatgggtatcctggatccaactaaggtaacc
cgttctgctctgcaatacgcatcttctgttgctggcctgatgatcaccactgagtgcatg
atcaccgacctgccaaaagatgataaaggcgatatgggcggcgctggcggtatgggtgga
atgggcggcatgggcggcatgatgtaa
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