Rahnella inusitata: I2123_08460
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Entry
I2123_08460 CDS
T09790
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
riu03032
]
I2123_08460 (gyrA)
03400 DNA repair and recombination proteins [BR:
riu03400
]
I2123_08460 (gyrA)
Enzymes [BR:
riu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I2123_08460 (gyrA)
DNA replication proteins [BR:
riu03032
]
Prokaryotic type
DNA Topoisomerases
I2123_08460 (gyrA)
DNA repair and recombination proteins [BR:
riu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I2123_08460 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QUT16794
LinkDB
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Position
1796663..1799314
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AA seq
883 aa
AA seq
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MSDLAREITPINIEEELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEIRMSKIAHELLADLEKDTVDFVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAFIEDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
SIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQTSFGINMVALHRGQPKILGLKEILSAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRAAQSPAEAKAGLIARSWDLGNV
AAMLASAGDDAARPEWLEPEFGIHEGKYFLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLVQIAELMYILSNPDRLMEVIREELEAIRDQYNDPRRTEITANSSDINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILMFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHVFMATASGTVKKTAL
TDFSRPRSAGIIAINLNEGDELIGVDLTDGNNEVMLFSAAGKVVRFSEEAVRSMGRTATG
VRGIRLGEGDSVVSLIIPRGDGCILTVTQNGFGKRTESAEYPTKSRATQGVISIKVSERN
GPVVGAIQVDEADQIMMITDAGTLVRTRVSEVSTVGRNTQGVTLIRTAEQEHVVGLQRVA
EPVEDEELDGVATEAGELEAAQAADLPDEAESEDDQPADDEEE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccgattaacatcgaagaagagctgaaaaactct
tatttggattatgcgatgtccgtgattgtcggacgtgcgctaccagatgtgcgtgatggt
ttgaaaccggtgcaccgccgcgtacttttcgcaatgaacgtcctcggtaacgactggaat
aaagcctataaaaaatcggcccgtgtggtcggtgacgttatcggtaaatatcacccacac
ggtgataccgcggtttatgacaccattgtccgtatggctcaacctttctcacttcgctac
atgctggtggacgggcagggtaacttcgggtcagtggatggcgactccgccgcagccatg
cgttataccgaaattcgcatgtcaaaaattgctcacgaattgctggctgacttagaaaaa
gacaccgtcgatttcgtgccaaactacgatggcaccgagcaaatccctgctgttatgcca
acccgtattcctaacctgctggtcaacggctcgtcaggtatcgcggtaggtatggcgacc
aacattccgccgcataacctcactgaggttatcaacggctgcctggccttcattgaagat
gagaacatcagcatcgaagggctgatggaacacattccggggccagatttcccgaccgcg
gcgatcatcaacggtcgtcggggtatcgaagaagcttaccgtaccggccgtggcaagatt
tcgatccgtgcccgcgctgaagttgaagcggacgccaaaaccggtcgcgaaaccatcatt
gttcacgagatcccgtatcaggtgaacaaagcccgtctgatcgaaaagatcgccgagctg
gtgaaagaaaaacgcgttgaaggtatcagtgcgctgcgtgatgagtccgataaagacggt
atgcgtatcgtcatcgaaatcaaacgcgacgccgtcggtgaagtggttctgaacaacctg
tactcactgacgcagctgcagacctctttcggtatcaacatggtggcattacaccgtggt
cagccgaaaattttgggtctgaaagagattctgtccgcgtttgttcgccaccgccgtgaa
gtggtaacacgccgtactattttcgaactgcgtaaagcccgcgaccgtgctcatatcctt
gaagcactggcgatcgcattggctaacatcgacccgatcattgaactgatccgtgctgca
caatctccggccgaagcgaaagcgggcctgattgcgcgttcatgggatctgggcaacgtt
gcggcaatgctggccagtgccggtgatgacgcggcacgccctgaatggctggagccagag
ttcggtattcatgaaggtaaatacttccttaccgagcaacaggcacaggctattttggat
ctgcgcttgcagaaactgaccggcctcgagcatgaaaaactgcttgatgagtacaaagag
ctgttggtgcaaatcgcagagctgatgtacatcctgtccaacccggatcgtctgatggaa
gtcattcgtgaagagctggaagcgatccgcgatcagtataacgatccgcgtcgtaccgaa
atcacggcgaactcatctgacatcaacatcgaagacctgatcaatcaggaagacgttgtg
gtgaccttgtcgcatcagggctacgtgaagtatcagcctctgaccgattacgaagcgcag
cgtcgcggcggtaaaggtaaatcagcagcccgtattaaagaagaagacttcatcgaccgt
ctgctggtggccaacacccacgacactattttgatgttctccagccggggacgtctgtac
tggatgaaagtctatcagttgccggaagccagtcgtggcgcacgtggccgtccgatcgtc
aacctgttaccgctcgaacccaacgaacgtatcaccgccattctgccagtacgcgagtac
gaagaaggccgtcatgtgttcatggcaacggcaagtggtaccgtgaagaaaacggcactg
accgatttcagccgtccgcgcagcgccggcatcatcgccatcaacctcaatgagggtgat
gagctgattggtgtggatctgaccgacggtaacaacgaagtcatgctgttctctgcagcc
ggtaaagtggtgcgcttctccgaagaagcggtgcgttcaatgggccgtacggcgaccggt
gttcgcggtatccgtctgggcgaaggcgacagcgtcgtctccctgatcattcctcgcggc
gacggttgtatcctcactgtgacgcagaatggtttcggtaaacgtactgaatctgccgaa
tatccaaccaaatcccgcgcaacgcagggcgttatctcgatcaaagtgagcgagcgtaat
ggtccggtagtaggggctatccaggtggatgaagcggatcagatcatgatgatcaccgat
gctggtacgctggtgcgtacacgtgtatccgaagtgagcaccgttggccgtaatacccag
ggtgttacgcttatccgcaccgctgagcaagaacacgtggtcggtcttcaacgtgtggcg
gaaccggtagaagatgaagaactggatggcgttgccaccgaagcgggcgaactggaagcg
gcacaagcagccgatctgccagacgaagcagaaagtgaagacgatcagccagcagacgac
gaagaagaataa
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