Rahnella inusitata: I2123_08935
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Entry
I2123_08935 CDS
T09790
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riu03400
]
I2123_08935
DNA repair and recombination proteins [BR:
riu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
I2123_08935
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
DUF7577
SWI2_SNF2
AAA_30
zf-tcix
AAA_16
Zn_ribbon_3
SLFN-g3_helicase
DZR
Zn_Ribbon_1
LonC_helical
AAA_22
DUF7621
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-ProteinID:
QUT16886
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All DBs
Position
complement(1914805..1916568)
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AA seq
587 aa
AA seq
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MTAFTLRPYQQDAVDATLRHFRQHDEPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVK
ELVAQNHSKYLSYGLEADIFAAGLNLKQSSGKVVFGSVQSVAPNLAAFSGEFSLLIVDEC
HRISDDDTSQYQQIITHLKAQNPRLRLLGLTATPYRLGKGWIYQYHHQGIVRGDANSLFR
DCIYELPLRYMIKNGFLVPPERLDMPVVSYDFSRLQANSNGLFSEADLNNELRQQKRITP
HIISQIVEFSQDRKGVMIFASTVEHAGEIFGLLPKGEAALISAQTHAVERDRLITAFKQQ
QLRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGN
PHDLFTPEVGSHKPAGDNKPVQVFCPACGFANIFWGKTTEDGTIIEHFGRRCQGVLEDDD
GNREQCDFRFRFKSCPHCGAENDIAARRCHQCQEILVDPDDMLKAALRLKDALVLRCGGM
NLEHGRDDKGEWLKITYYDEDGADVSERYRLSTPAQRMAFLHNFLRPHQRAPGVPLEWNT
AADIVAQQVLLRHPDFVVARMKGQFWQVREKMFDYEGRYRRANELRG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcttttacactccgcccctatcagcaagatgccgtggatgccacgctgcgtcat
ttccgtcagcacgatgaaccggcggtgattgtgctgcccacaggcgccggaaaaagtctg
gtgattgccgaactggcccgcgtggcgcgtggccgcgtgctggtgctggcgcacgtcaaa
gaactggtcgcgcaaaatcacagcaaatatctttcctacggtctggaggcggacatcttt
gccgccgggctgaatcttaaacaaagcagcggcaaagtggtgtttggtagcgtgcagtcc
gtcgcccccaatctggcggcgttcagcggcgagttttccctgctgattgtcgatgaatgc
caccggatttccgacgacgataccagccagtaccagcaaatcatcacccacctgaaagcg
cagaatccgcgcctgcggctgctcgggctgacggccacgccctatcgtctcggcaaaggc
tggatttatcagtatcaccatcagggcattgtgcgcggcgacgccaacagcctgttccgc
gactgtatttatgaactcccgctgcgttacatgatcaaaaatggctttctggtgccgccg
gaacggctggacatgccggtggtcagctacgatttcagccgtttacaagccaacagcaac
gggctgttcagtgaagcggatctcaacaacgaactgcgccagcaaaaacgcatcacgccg
cacatcatcagccagattgtcgaattctcgcaggatcgcaaaggcgtcatgatctttgcc
tccaccgtcgaacacgcaggggagattttcggtttgctgccaaaaggcgaagcggcgctt
atcagcgcacaaacccatgcggtcgagcgtgaccggctgatcaccgcctttaaacagcag
cagttacgctatctggtcaacgtttcagtgctgaccaccggcttcgatgcgccgcacgtc
gacctgatagccattttgcggccaaccgaatccgtcagcctgtaccagcaaattgtcgga
cgcgggctgcgtctcgcgccgggaaaaactgactgtctgatcctcgattacgccggaaat
ccgcatgacctctttacaccggaagtcggcagccataagcctgcgggcgataacaaaccg
gtgcaggtgttctgcccggcctgcggcttcgccaatatcttttgggggaaaaccactgaa
gacggcacgattatcgagcattttggccgccgctgtcagggtgtgctggaagatgacgac
ggcaaccgcgagcagtgtgatttccgctttcgcttcaaaagctgcccgcactgcggcgca
gagaacgacatcgccgcgcgccgctgccatcagtgtcaggaaattctggtcgatcctgac
gatatgctcaaagccgcactgcgcctgaaggatgcactggtactacgctgcggcggcatg
aatcttgaacacgggcgcgatgataaaggcgaatggctgaaaatcacctattacgatgag
gatggcgcagacgtctccgaacgttaccggctcagcacgcccgcccagcgaatggctttt
ttgcataatttcctgcgtccgcatcagcgagcgccgggcgtaccgctcgaatggaacacc
gcggcggatatcgtcgcgcagcaggttttgttgcggcacccggattttgtggtcgcgcgt
atgaaaggtcagttctggcaggtgcgggaaaagatgtttgattacgaggggcgataccgg
cgtgccaacgagctgcgcggataa
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