Rahnella inusitata: I2123_09495
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Entry
I2123_09495 CDS
T09790
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
riu
Rahnella inusitata
Pathway
riu03030
DNA replication
riu03430
Mismatch repair
riu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I2123_09495 (holB)
03430 Mismatch repair
I2123_09495 (holB)
03440 Homologous recombination
I2123_09495 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
riu03032
]
I2123_09495 (holB)
03400 DNA repair and recombination proteins [BR:
riu03400
]
I2123_09495 (holB)
Enzymes [BR:
riu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I2123_09495 (holB)
DNA replication proteins [BR:
riu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I2123_09495 (holB)
DNA repair and recombination proteins [BR:
riu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I2123_09495 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
DUF6925
Motif
Other DBs
NCBI-ProteinID:
QUT16988
LinkDB
All DBs
Position
2028931..2029950
Genome browser
AA seq
339 aa
AA seq
DB search
MSWYPWLSAPYRQLIGQYQAGRGHHAVLMHVAAGMGDEALVYGLSRWLLCQHKDGEKSCG
KCHSCQLMIAGNHPDWHVLQPEKGKNSLGIDPVRQLIETLYNYSQQGGAKVVWIPQTELL
TEAAANALLKTLEEPPAGTYFLLGCREPSSLLATIRSRCFYWHLPVPEEALSVQWINRQM
NTDPVSVKTALRLTNGAPLSALELLQPERWKQRVALCQQLYIQCQQQDMLSLLTQLNHDD
AADRIYWLASLLLDAIKWQQHAAQFILNHDQQPLIALLASAQPNASLQQSVSAWMQCRQQ
LLSIVGVNRELLLTEQLLEWEQMLQGAVSPSHFSSGMMR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtatccgtggctgagtgccccctatcgccaactgatcggacaatatcaggcc
ggtcgcggacatcacgctgtgctgatgcacgttgctgcgggcatgggtgatgaagcgctg
gtttacggtctgagccgctggttactgtgtcagcataaagacggcgaaaagagctgcggc
aaatgccacagctgccagctgatgattgccggaaaccaccctgactggcacgtgttgcag
ccggaaaaaggtaaaaactcactgggcatcgaccctgtgcgtcagctgattgaaacgttg
tacaactattcgcagcagggtggggcgaaagtggtgtggatcccgcagaccgaattgctg
acggaagccgccgccaatgccttactcaaaacgctggaagaaccgcccgcggggacctat
ttcctgctgggctgtcgggaaccttcgtctttactggcgaccatccgcagccgctgtttc
tactggcatctgccggtgcctgaagaagcattatcggtgcagtggatcaaccgccagatg
aacaccgatccggtttcagttaaaaccgcattacgcctgaccaacggtgcaccgctttct
gcgctagagctgttgcagccggaacgctggaaacagcgcgtggcgctttgccagcagctt
tacatccagtgtcagcagcaggatatgttgtcgctgctgacgcagctaaaccatgacgat
gccgctgaccgcatctactggctggcctcgctgctgcttgatgccatcaaatggcagcaa
cacgcggcgcagtttattctcaatcatgatcagcagccgcttatcgcgttgctggccagt
gcgcagcccaacgcctcgctgcaacagtcggtatcggcctggatgcagtgtcgtcagcag
ttgctttctatcgtgggtgtgaaccgcgaactgctgctcaccgaacagctgctggaatgg
gaacaaatgctgcagggcgccgtgtctccttcccacttcagctcaggcatgatgcgctga
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