Rahnella inusitata: I2123_10415
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Entry
I2123_10415 CDS
T09790
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
riu
Rahnella inusitata
Pathway
riu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
I2123_10415
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
riu01002
]
I2123_10415
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
riu01011
]
I2123_10415
Peptidases and inhibitors [BR:
riu01002
]
Cysteine peptidases
Family C82
I2123_10415
Peptidoglycan biosynthesis and degradation proteins [BR:
riu01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
I2123_10415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
QUT17159
LinkDB
All DBs
Position
2218093..2219106
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AA seq
337 aa
AA seq
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MRRALPLLAMLVGTMMATHSLTASAAEYPLPPDNSRLIGENTTYVVPNDGQPLEAVAAKY
QIGLIAMLEANPGTDPYLPKPGTVLTIPSQMLLPDTKREGIVVNLAELRLYYYPKGEDKV
VVYPIGIGQLGRNTPEMITSVSQKIPNPTWTPTANIRKAYLKDGIKLPGMVPAGPENPMG
LFAMRLSAGTGQYLIHGTNANFGIGMRVSSGCIRLRPDDIEALFNTVPKGTRVQIVNQPI
KYDIEPDGKRYIEVHQPLSHTEKDDPQTKPIALTAAMKKFIKHDDTNAEMVKEAIKRRSG
MPVVVSVGDKATGTAPAVNEPQTAAATQPAVDTASTQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcgcattaccccttctggcaatgttagttggcacaatgatggcaacgcactcc
ctgaccgcaagtgcagcagaatatcctctgccgccggataatagccgcctgattggcgaa
aacacgacttatgtggtgccaaacgacggccagccgcttgaagccgttgccgccaaatat
caaattggcctgatcgctatgctggaagccaatccgggcaccgatccttatttgccgaaa
cccggcacggtgctgaccatcccttcgcaaatgctgttacctgacaccaagcgtgaaggt
attgtggtcaacctcgcggaattgcgtctgtactactatccgaaaggcgaagataaagtc
gtcgtctatccgattggtattggccagttgggtcgtaacaccccagagatgatcacatcg
gtcagccagaaaatccctaatccgacctggacgcctaccgccaatatccgtaaagcctac
ctgaaagacggtattaagctgcctggcatggtgccagcggggccggagaacccgatgggg
ctgtttgcgatgcgtttgtcagcagggacagggcagtacctgatccacgggacaaacgct
aactttggtatcgggatgcgcgtgagttccggttgtatccgtctgcgccctgatgatatt
gaggcgctttttaacaccgtgcctaaagggactcgtgtacaaatcgtcaatcagccgatc
aaatatgacatcgaacctgacggtaaacgctatatcgaagtacatcagccactctcacac
accgaaaaagacgatccgcagaccaaaccgattgcgctgactgcagcgatgaagaaattc
atcaagcatgacgacacgaatgctgagatggtgaaagaagccattaaacggcgttcaggc
atgcctgtggtagtaagcgtcggtgataaagcgacgggaacggccccggctgtcaacgaa
ccgcagaccgcagcggccacacaacctgcagtggatacagcaagtacgcagtaa
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