Rahnella inusitata: I2123_14420
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Entry
I2123_14420 CDS
T09790
Symbol
lsrD
Name
(GenBank) autoinducer 2 ABC transporter permease LsrD
KO
K10557
AI-2 transport system permease protein
Organism
riu
Rahnella inusitata
Pathway
riu02010
ABC transporters
riu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I2123_14420 (lsrD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I2123_14420 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
riu02000
]
I2123_14420 (lsrD)
Transporters [BR:
riu02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
I2123_14420 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
QUT13907
LinkDB
All DBs
Position
complement(3086876..3087898)
Genome browser
AA seq
340 aa
AA seq
DB search
MKILQQYGWEAALLALLILEILLFGFANPRMLDANTLLFSTSDFITIGIVALPLTLVIVS
GGIDISFGSTIGLCAIALGVLCQAGVPLALAIALTLALGAACGLLNAALILYTGVNPLVI
TLGTLYLFGGSALLLSGLAGATGFEGIGNFPDAFTNFANQVVLGLPMPLLIFLAATLFFW
LLMHRSRTGRNVFLIGQNARVARYGALPVSRTVFALYGMTGLASAVAAILMTSYFGSARS
DLGNALLMPAITAVVLGGANIYGGSGSILGTALATLLIGYLQQGLQMVGVSSQVSSALSG
ALLILVVIGRSASLNRGLIRSVFQRYRQRWSASSPSLLSK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttcaacagtatggctgggaggcggcgctgctggcgttgctgatactggag
attctgctgtttggcttcgcaaatccgcgaatgctcgatgccaatacgttgttgttcagc
accagtgatttcatcactatcggcattgtggcactgccgctgacgctggtgattgtcagc
ggtgggatcgacatttccttcggctcaaccatcggcctgtgcgccatagcactcggcgtc
ttgtgtcaggccggtgtgccgctggcgctggcgatagctctcacgctggcactcggcgcc
gcctgcggtttacttaacgcggcgctgatcctctataccggcgtcaatccgctggtgata
acgctcggcacgttgtacctgttcggtggcagcgccttgctgctctccgggctggcgggc
gcgaccggctttgaaggcatcggtaatttcccggatgccttcaccaattttgccaatcag
gtggtgctcggcctgccgatgccgctgctgattttcctcgccgcgacgctgtttttctgg
ctgctgatgcaccgcagtcgcacggggcgcaacgtgtttctcatcggccagaacgcccgt
gtggcgcgctacggtgcgctgccggtcagccggacagtctttgcgttgtacggcatgacc
gggctggcgtcggcggtagcggcaatcctgatgacctcttatttcggctcggcgcgttcc
gatctcggcaatgcgctgctgatgcctgcgatcactgccgtggtgctcggtggcgcgaat
atctacggcggttcgggttccattctcggcacggcgctggcgacgctgctgatcggctac
ttacaacagggcctgcagatggtcggcgtttccagtcaggtttccagcgcgctgtccggt
gcgctgctgattctggtggtaattggccgctctgccagccttaaccggggtcttatccgc
agtgttttccagcgttaccgccagcgctggtctgcgtcttctccttctttattatccaaa
tga
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