Rahnella inusitata: I2123_14430
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Entry
I2123_14430 CDS
T09790
Symbol
lsrA
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
riu
Rahnella inusitata
Pathway
riu02010
ABC transporters
riu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
I2123_14430 (lsrA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I2123_14430 (lsrA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
riu02000
]
I2123_14430 (lsrA)
Transporters [BR:
riu02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
I2123_14430 (lsrA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
RsgA_GTPase
KdpD
AAA_29
MukB
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QUT13909
LinkDB
All DBs
Position
complement(3088968..3090521)
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AA seq
517 aa
AA seq
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MQQPEQVLASTTLLLQVSGLSKSFSGVAVLKDIGFSLYAGEVHALLGGNGAGKSTLMKII
AGVETADCGEMQLGGAPLSGLTPAKAHQAGIYLVPQEPMLFPSLTVRENILFRLPARQAS
EKKLIETLTGLGCNLPLGALAGTLEVADQQLVEILRGLMRDARLLILDEPTASLTPAESA
RLFTQVRHLTAKGVGVVFISHKLPEIRAIADRVSVMRDGKIALSGTLAELDNDALIRAIT
PHTQDLALPAEQKLWLDLPGQRRNVKGREPVLQVENLTGEGFIDISFSARAGEIVGLAGV
VGAGRTELAETLYGLREAKSGQVRLMQQDISGLNTLQRLQKGLVYLPEDRQASGLYLDAP
LSWNTTSLTFNRQTWWLNLKREAAVLERYHRALGIKYRDGSQTARTLSGGNQQKLLIAKC
LEAQPAVLIVDEPTRGVDVSARADIYQLLRNVVEQNVAVILISSDLDEIEALADRVFVMH
QGEMSGELQGSEINVNNIMHIAFGNHPQTAATGGSSC
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccagaacaggtcttagcctcaaccacgttgctgttacaggtgagcggcctc
agcaaaagcttttccggcgtggcggtgctgaaagatatcggtttcagtctctacgccggg
gaagttcacgcgctgctggggggtaacggggcggggaaatccacgctgatgaaaatcatc
gccggtgtcgaaaccgctgactgcggcgaaatgcagctcggcggtgcaccgctgtcgggg
ctaacaccggcgaaagcgcatcaggcgggcatttatctggtgccgcaggagccgatgctg
tttccgagcctgaccgtacgtgaaaatattctgttccgtttacccgcccgtcaggccagc
gagaaaaaactgatcgaaacgctgaccggcctgggctgcaatcttccgctcggcgcgctg
gccggaacgctggaggtggctgatcagcagctggtggaaatcctgcgcggtctgatgcgc
gacgcacgtttgttgatccttgatgaaccgaccgcctccctgacgcccgccgaatccgcc
cgcctgttcacgcaggttcgtcatctcactgcgaaaggcgtcggcgtggtgtttatctcc
cacaagctgccggaaatccgcgcgattgccgaccgggtcagcgtgatgcgcgacggaaaa
attgccctcagcggcacgctggccgaactcgataacgatgcgctgatccgcgccatcacg
ccgcatacgcaggacttggcgctgcccgccgaacaaaagctgtggctggatttgcctggt
caacggcgcaatgtcaaagggcgtgaaccggtcttgcaggtagaaaatctcaccggtgaa
ggcttcatcgatatttcatttagcgcccgcgccggggaaatcgtcgggctggcaggcgtt
gtcggggcaggtcgaaccgaactggcagaaacgctgtacggcctgcgcgaggcaaaaagc
ggtcaggtgcgtctgatgcagcaggacatcagcgggctgaatacgttgcaacgcctgcaa
aaggggctggtgtatctgccggaggaccggcaggcatccggcttgtatcttgatgcaccg
ctaagctggaataccacctcgctgacctttaatcgtcagacctggtggctcaaccttaaa
cgcgaagcggcggtgctcgaacgttatcaccgcgcgctggggattaagtaccgcgacggt
tcacaaaccgcccgcacgctgtccggcggcaatcagcagaagctgttgatcgccaaatgc
ctggaagcgcagcctgcggtgctgatcgtcgatgagccgacgcgcggcgtggacgtctca
gcccgcgccgatatctatcagctgctacgcaacgtggttgaacagaacgtcgcggtgatc
ctgatttcttccgatctggatgaaattgaggcgctggccgatcgcgtattcgtcatgcat
cagggcgaaatgagcggcgaattgcagggcagcgagataaacgtcaacaacattatgcac
atcgcttttggtaaccatccccagactgccgccaccggaggatcctcatgctaa
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