Rahnella inusitata: I2123_16510
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Entry
I2123_16510 CDS
T09790
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
riu03009
]
I2123_16510
Ribosome biogenesis [BR:
riu03009
]
Prokaryotic type
ribosomal protein modification factors
I2123_16510
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GFIT
Motif
Pfam:
YcaO
YcaO_C
TPR_4
Motif
Other DBs
NCBI-ProteinID:
QUT14273
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Position
3505211..3506974
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSISRFQQKLTDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKEIANGDFVHYPNEKWFPIAEDNTLPEG
ILDERLHEFYDADKELVASDLIDLQSGNPDRGICALPFTRQSDLQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPGVVEAIAKLEEE
GFPILSYDASLGGNYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKQDADYPFADWSFSGSTEEEFATLM
AIFDKEDAEVYIADYEHLDVYACRIIVPGMSDIYPAEDLLLANNSMGAHLREQLLALPDS
DLPKEAYLEMITQLDDEGLDDFTRVRELLGIASGKDNGWYTLRVGELKSMLALAGGDFDQ
ALTWAEWAHEFNSSVYSDERNNYYRCLQTLLQLSLEEDREPAQYYNAFVKMYGQKAVEDA
SAAISGEVRFHSLFAIDPDLKALPAHQALLGAYEKLQVAKRRHWSKA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacttttattcctggtaaagacgcggcgctggaagactccatttcccgcttc
caacaaaaactcaccgatctcggttttaacatcgaagaagcttcctggctgaacccggtt
ccgcacgtctggtccgtgcatatccgcgatcgcgactgtccgctgtgtttcaccaacggt
aaaggtgcgagcaagaaagccgctctggcgtctgcgctgggtgaatattttgagcgtctg
tcgacaaactatttcttcgctgatttctatctgggtaaagaaattgccaatggtgatttc
gttcattatccgaacgaaaaatggttcccgattgccgaagataacacgctgccggaaggc
attctggatgagcgcctgcatgagttttacgatgcggacaaagagctggtggcgagcgat
cttatcgatctgcaatcgggcaatcccgatcgcgggatctgcgccctgccgttcacccgc
cagtctgatctgcaaactgtgtacattccgatgaacatcatcggcaacctgtatgtgtcc
aacgggatgtcggccggtaacactgccaacgaggcacgtgtgcagggtctttcagaagtc
ttcgagcgttacgttaaaaaccgcatcattgctgaatccatcagcctgcctgaaattcct
gccgacgtgctggcgcgttatccgggtgtggtggaagctattgcgaaactggaagaagaa
ggtttcccgatcctctcttatgacgcctcactgggcggcaactatccggtcatttgcgtg
gttttgttcaacccggctaacggcacctgtttcgcctcatttggcgcgcaccctgatttc
ggcgtggcacttgaacgtaccgtgaccgaattactgcagggccgtagcctgaaagatctg
gatgtgttcaccccgccgactttcgatgacgaagaagttgctgaacacgctaacctcgaa
acgcacttcatcgattcaagcggtttgatttcgtgggatatgtttaaacaagacgcagac
tatccgtttgctgactggagtttcagcggatcgaccgaagaagagttcgctacgctgatg
gccatctttgataaagaagatgctgaagtatacatcgccgattacgagcatctggacgtt
tacgcttgccgcatcatcgttcctggcatgtctgatatttatccggcggaagatttattg
ctggccaataacagcatgggcgcacatctgcgcgaacagttgctggcactgcctgacagc
gatttgccgaaagaagcctatctcgagatgataactcagctagacgatgaaggtttggat
gacttcacccgcgttcgcgagctgttgggtatcgccagcggcaaggataacggctggtac
accttgcgcgtgggcgagctgaaatcaatgctggcactggcgggcggcgatttcgatcag
gcactgacctgggcggaatgggcgcatgagttcaactcatcggtctacagcgacgaacgc
aacaactactatcgttgtctgcaaaccctgcttcagctttcgttggaagaagatcgcgaa
ccggctcagtactacaatgccttcgtgaaaatgtacggtcagaaagcagtggaagatgct
tctgcggcgataagcggcgaagtgcgtttccacagcctgtttgccattgacccggatctt
aaagcgctgcctgctcatcaggcgcttctgggtgcgtacgaaaagctgcaggtggctaag
cgtcgccactggtctaaagcctga
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