Rahnella inusitata: I2123_16565
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Entry
I2123_16565 CDS
T09790
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
riu
Rahnella inusitata
Pathway
riu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
I2123_16565 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
riu01007
]
I2123_16565 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
riu03016
]
I2123_16565 (serS)
Enzymes [BR:
riu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
I2123_16565 (serS)
Amino acid related enzymes [BR:
riu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
I2123_16565 (serS)
Transfer RNA biogenesis [BR:
riu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
I2123_16565 (serS)
Prokaryotic type
I2123_16565 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NPV_P10
CENP-F_leu_zip
Vps5
USP8_interact
KIF21A
Troponin
Phage_GP20
Sos7
Motif
Other DBs
NCBI-ProteinID:
QUT14283
LinkDB
All DBs
Position
complement(3521044..3522336)
Genome browser
AA seq
430 aa
AA seq
DB search
MLDPNLLRNELDAVAEKLARRGFKLDVEKLRSQEERRKVLQVETETLQAERNARSKTIGQ
AKARGEDIEPLRQEVTTLGEKLDAAKAELDALQNEIRDIASAIPNLPDDSVPAGKDENDN
LEVSRWGTPRQYDFDVRDHVSLGEMAGGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFM
LDLHTEQHGYLEAYVPYLVNHETLYGTGQLPKFGEDLFHTKPLDEEAGSSNYALIPTAEV
PLTNLVRDEILEEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED
SMQALEELTGHAEKVLQLLNLPYRKMLLCTGDMGFGSSKTYDLEVWLPAQDTYREISSCS
NMWDFQARRMQARCRSKTEKKPRLVHTLNGSGLAVGRTLVAVLENYQLADGRIEVPEVLR
PYMGGLEYIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatctgctgcgtaatgagctagacgcagttgcagaaaaactcgctcgc
agaggttttaaactcgatgtggaaaagctgcgttctcaggaagagcgccgcaaagtcttg
caggtagaaacggaaactctccaggctgaacgtaacgcacgatcgaaaactatcggtcag
gctaaagcccgtggcgaagacatcgaacccctgcgtcaggaagtgactacgctgggtgag
aaattggatgcagcgaaagctgaactggacgcattgcaaaatgaaatccgggatattgct
tccgccattcctaacctgccagatgattccgtacctgccggtaaagacgaaaacgacaac
cttgaagtgagccgttggggaaccccacgtcagtacgattttgacgtacgcgatcatgtt
tcgttgggcgaaatggctggcggtctggatttcgcggctgcggtaaaactgacgggttca
cgctttgtggtgatgaaagggcaaatcgcccgcatgcaccgcgcgctttcccagttcatg
ttggatctgcataccgaacagcacggttatctggaagcgtacgttccttacctggtcaac
catgagacgctgtacggcactggccagttaccgaagtttggtgaagatttgttccacacc
aagcctctggacgaagaagcgggcagcagtaactatgcgctgatcccaacggctgaagta
ccgctgaccaatctggtgcgtgacgaaattcttgaagaagaatcgctgccactgaagatg
actgcacatacgccatgcttccgttccgaagccggttcttatggtcgtgatacccgtggc
ctgatccgtatgcaccagttcgataaagtcgagatggtacagattgttcgcccggaagat
tccatgcaggcgctggaagaactgaccggccatgcagagaaagtgcttcagttgctgaat
cttccgtatcgcaaaatgctgctttgtacgggcgatatgggctttggttcaagtaaaacc
tacgatctggaagtatggttgccagcgcaggatacgtaccgtgaaatctcttcatgctca
aacatgtgggatttccaggcacgtcgtatgcaggcgcgttgtcgcagcaaaaccgagaaa
aaaccgcgtctggttcataccctgaacggttccggtctggctgttggccgtactctggtt
gctgtgctggaaaactaccagctcgcagacggtcgtatcgaagtgcctgaagtactgcgt
ccttacatgggcggtttagaatatatcggctaa
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