Rahnella inusitata: I2123_17120
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Entry
I2123_17120 CDS
T09790
Symbol
ybiO
Name
(GenBank) mechanosensitive channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
riu02000
]
I2123_17120 (ybiO)
Transporters [BR:
riu02000
]
Other transporters
Pores ion channels [TC:
1
]
I2123_17120 (ybiO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
QUT14386
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Position
3653623..3655857
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AA seq
744 aa
AA seq
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MPHNDRTPLAHRIHTHLFSALLFITLAMFSAFSHAAEEKPAAGDQQKASYAALADILQDD
KARAELITHLREAARAEPAAANAETKMNEPQAEQLSLIDQLVDTTQQTASGIMKRVQELK
NTINSGPQHHFNAARFFPALGYFLLTVAVTFAFFHLIRRLIGPLYLRLGRWGNHARMKET
HWYKLPASIIGAFAVDLGILLLTVAAGNLFAQYVNGGSPLIARLQALFLSAFAVIEFFKA
VLRLIFSPSFGYLRPFPLADVTARYWNTRLAWVSGLIGYALMVGVPVVATQINYTTAAVV
NFVVMLALTIYASWLILHNRRTIHHEFNQLAERSMAFFSVILRALGHVWHLLAVSYFVVL
FFLSQFDFAGSLRFMMAATIKSLVIIGLGALISGLLSRWISRRITLPDDVNRRYPLLQKR
INSYIPAGLKIIRVLVVLSVTLSLLDAWQIFNLNKWFMTETGEKVISGLGHMLFILCFAI
VAWTLLASVIEHRLAQELSNGARPSARERTLLTLFRNVLAIVICTITIMIMLSQVGLNIA
PLLAGAGALGLAVSFGAQTLVKDVITGIFIQFENGMNTGEYVTVMGISGTVERMTIRSIG
LRDIYGVYHIVPYSSITTLSNYEREFGVYRASYNVSRDEDVDAANAVLREAVEALKQDEN
IKPLLLGEPTYQGVVGLGDQFFTLRVLVRTKALEQWTVQYALDRLVKNHFAKAGIEMPRQ
AVQIYKDEAGAGASEAFPVVGPER
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgccgcataacgacaggactccgttggctcaccgcatccatacacatctattttcggct
ctgctgtttatcaccctcgccatgttcagtgccttcagccacgcggctgaggagaaaccc
gctgcgggcgatcagcaaaaagcctcttacgccgcgctggccgatattcttcaggatgac
aaagcccgcgctgaactgattacgcacctgcgtgaagccgcacgcgctgaaccggcagca
gcaaacgcagaaaccaaaatgaatgaaccgcaggccgaacagctatcgctgattgaccag
ctggtggataccactcagcagacggcctccgggatcatgaagcgcgtgcaggaattgaag
aacaccatcaattccgggcctcagcatcattttaatgctgcgcgattcttccccgcgctg
ggctattttctgctgaccgtcgccgtgacctttgcatttttccatctgatccgccggtta
atcggcccgctgtacctgcgccttggccgctggggaaatcatgcccggatgaaagagacg
cactggtacaaactgcccgccagcatcatcggtgcgttcgcagtcgatcttggtattttg
ctgctgaccgtcgccgccggtaatttatttgcccaatacgtcaacggcggcagcccgctg
attgcgcggttgcaggccttattcctgagtgccttcgcggtgatcgaattcttcaaagcc
gtcctgcgactgatcttttcaccgagcttcggttatctacgccctttcccgctggctgac
gtcaccgcccgctactggaatacccgtctggcgtgggtgagcggcctgatcggctatgcg
ctgatggtcggcgtgccggtggtcgccacacaaatcaactacaccaccgccgccgtggtg
aattttgtggtcatgctggcactgacgatttacgccagctggctgatcctgcataaccgc
cgcaccatccatcatgaatttaaccagctggccgaacgctcgatggcgtttttcagcgtg
atcctgcgcgccctcggccacgtctggcacctgctggcagtcagttatttcgtggtgctg
ttcttcctttcgcagtttgatttcgccggcagcctgcgctttatgatggctgcgaccatt
aaaagtctggtgattatcggcctcggcgcgctgatatccggcctgctttcgcgctggatc
agccgccgtatcacactgcctgacgacgtcaaccgccgttatccgttgctgcaaaaacgc
attaactcctacattccggcgggtctgaaaatcatccgcgtgctggtagtgctgagcgtg
acgctttctctgctcgatgcatggcagatctttaatctcaacaagtggttcatgaccgaa
accggtgagaaggtgattagcggtctggggcatatgctgtttattctgtgcttcgcgatt
gttgcctggactctgctggccagcgtcatcgaacaccgactggcgcaggagcttagtaac
ggtgcgcgcccgagcgcccgtgagcgcacgttgctgacgctgtttcgcaacgtgctggcg
atcgtgatttgtaccatcaccattatgatcatgctgtcgcaggtcgggctcaatatcgcc
ccgctcctggccggtgccggtgcgctcggtctggcagtcagcttcggcgcgcaaacgctg
gtaaaagatgtgatcaccgggattttcatccagttcgaaaacggcatgaataccggcgaa
tacgtcacggtgatgggcatcagcggcaccgtcgagcgtatgaccatccgctcaattggc
ctgcgcgatatttacggcgtctatcacattgttccttactcttcgatcaccacgctctcc
aattacgaacgtgagtttggcgtttaccgcgccagttataacgtcagccgcgacgaagac
gtcgatgccgccaacgccgttctgcgcgaggccgtcgaagcgctgaagcaggacgaaaac
atcaaaccgctgctgctcggcgaaccgacctatcagggcgtcgtgggattaggcgatcag
ttcttcaccctgcgcgtgctggtgcggaccaaagcgctggagcaatggacggtgcagtat
gcacttgaccggttggtgaagaatcacttcgcgaaggcgggaattgaaatgccgaggcaa
gcagttcagatttataaagatgaagcaggtgctggtgccagcgaagcctttccggttgtt
gggcctgaacggtaa
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