Rahnella inusitata: I2123_17420
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Entry
I2123_17420 CDS
T09790
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
riu
Rahnella inusitata
Pathway
riu00020
Citrate cycle (TCA cycle)
riu00190
Oxidative phosphorylation
riu00650
Butanoate metabolism
riu00720
Other carbon fixation pathways
riu01100
Metabolic pathways
riu01110
Biosynthesis of secondary metabolites
riu01120
Microbial metabolism in diverse environments
riu01200
Carbon metabolism
Module
riu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
riu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
riu_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
I2123_17420 (sdhA)
00650 Butanoate metabolism
I2123_17420 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
I2123_17420 (sdhA)
00720 Other carbon fixation pathways
I2123_17420 (sdhA)
Enzymes [BR:
riu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
I2123_17420 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
QUT14438
LinkDB
All DBs
Position
complement(3713851..3715617)
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AA seq
588 aa
AA seq
DB search
MNLPVREFDAVVIGAGGAGMRAALQISQTGQTCALISKVFPTRSHTVSAQGGITVALGNT
HEDDWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHMGLPFSRLEDGRIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNGTTIFSEWYSLDLVKNQDGAIVGC
TAICIETGEVVYFKAKATVLATGGAGRIYQSTTNAHINTGDGVGMALRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCEGPWGPHVKLKLDHLGREVLESRLPGILELSRTFAHVDPIKEPIPVLPTCHYMMGGI
PTKVTGQALRVNEKGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGMHLQ
ESINEQGDSREASQDDIDVSLERLNRWNNTRSGEDPVAIRKDLQACMQNNFSVFREGDAM
AEGLEQLKVIRERLKSARLDDTSTEFNTQRVECLELDNLMETAFSTAVSANYRTESRGAH
SRFDFPDRDDANWLCHTLYQPETESMTRREVNMQPKLRAAFPPKARTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgccagtcagagagtttgatgctgtagtgatcggtgcaggtggcgccggtatg
cgtgcagcattacagatttcacaaacgggccagacctgtgccctgatttccaaagtcttc
ccgacccgctcccatacggtgtcagcgcagggcggtattaccgtcgcgctgggcaacacc
catgaggatgactgggaatggcatatgtacgacaccgtaaaaggttccgactacatcggt
gatcaggacgccattgaatatatgtgtaaaaccgggccggaagcgattctggaactcgaa
cacatgggtctgcctttctcccgtcttgaagatggccgtatttatcagcgtccgtttggt
ggccagtcgaagaacttcggcggcgagcaggcggcccgcacagcagcagccgctgaccgt
accggccacgcattgctgcacacgctgtatcagcaaaacctgaaaaacggcaccacgatt
ttctccgaatggtattcactggatttagtgaagaatcaggacggcgcgatcgtcggctgt
acggctatctgcatcgaaaccggtgaagtggtctacttcaaagccaaagcgaccgtgctg
gcaaccggcggtgcaggccgtatttaccagtccaccactaacgcacacatcaataccggc
gacggtgtgggtatggcgctgcgcgctggcgtgccagtgcaggatatggaaatgtggcaa
ttccacccgaccggtatcgccggtgcgggcgttctggtcacagaaggctgccgtggtgaa
ggcggttatttgctcaataaagacggcgaacgtttcatggaacgttatgcgccgaatgcc
aaagaccttgcgggtcgtgacgtggtggcacgttccatcatgatcgaaatccgtgaaggc
cgtggctgcgaaggtccgtggggcccgcacgtaaaactgaaactcgatcatctggggcgt
gaagtgctggaatcccgcctgccgggcattctcgaactctcccgcacctttgcccacgtg
gatcccatcaaagagccgatccctgtactgccaacctgccattacatgatgggcggtatt
ccgaccaaagtgaccggtcaggcactgcgtgtgaacgagaagggcgaagacgtggtgatc
ccagggctgttcgcggtcggcgaaattgcctgtgtttccgttcacggtgccaaccgcctc
ggtggcaactcgctgctggatctggtggtgtttggtcgcgctgccggtatgcacttgcag
gaatctatcaatgagcagggcgacagccgtgaagcctctcaggacgacattgatgtgtct
cttgagcgtctcaatcgctggaacaatacccgttccggtgaagatccggtggctatccgc
aaagacttgcaagcctgtatgcagaacaacttctcggtattccgcgaaggcgatgcgatg
gctgaaggtctggaacagctgaaagtgatccgcgaacgtctgaaatcggcccgtctggac
gatacctcgacggagttcaacactcagcgcgtggaatgtctggagctggataacctgatg
gaaaccgcgttctcgacggctgtctccgcaaactaccgcaccgaaagccgtggcgctcac
agccgctttgacttcccggatcgtgatgatgcgaactggctgtgccacacgctgtatcag
ccggaaaccgaaagcatgacccgccgtgaggtgaacatgcagcctaagcttcgcgcggcg
ttcccgccgaaagcgcgtacttactag
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