Rahnella inusitata: I2123_17485
Help
Entry
I2123_17485 CDS
T09790
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riu03400
]
I2123_17485 (phrB)
Enzymes [BR:
riu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
I2123_17485 (phrB)
DNA repair and recombination proteins [BR:
riu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
I2123_17485 (phrB)
Prokaryotic type
I2123_17485 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QUT14451
LinkDB
All DBs
Position
complement(3727454..3728884)
Genome browser
AA seq
476 aa
AA seq
DB search
MTTHLVWFRNDLRITDNRALHAACEDPQARVIALFIATPEQWKQHEMAPRQAAFIYQHLQ
SLQHSLAERGIPLHYHQCDDFAASVNWMKGFCETETVDALFYNKQYEINERLRDDALEKA
VGADVLCHAFDDSLLLPPGSVTTGNNEMYKVYTPFRRAFLSRLTESDSRSLPAPKAREHG
QKTVMHKLMPFDYPLENIDENFAVGEDAARNQLRSFCREQVQDYLQQRDLPAVDGTSSLS
PYLAIGVLSPRQCFNRLRTECPDVLDRTDGGAFGWLNELIWREFYRHLIVAWPKLCKHQP
FVGWTDGVHWRHAPEELQAWKEGKTGYPIVDAAMRQLNATGWMHNRLRMIVASFLVKDLL
INWREGERYFMSQLLDGDLAANNGGWQWGASTGTDAAPYFRIFNPTTQGERFDKAGRFIK
AWIPELSDVPEKDIHTPHRWAEKQHRVLDYPLPIIDHARARKDTLAAFEAAKNRSD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatttagtctggtttcgcaatgacttacgtattaccgataaccgcgcgctg
cacgccgcctgtgaggatccgcaggcgcgggtgatcgctctctttatcgccacgcctgaa
cagtggaaacagcatgaaatggcaccgcgtcaggcggcgtttatttatcagcatcttcag
tcgctacaacattctctggcggaacgcgggatcccgctgcattaccatcagtgtgatgac
ttcgcggcaagtgtgaactggatgaaaggtttctgcgaaacggaaacggtggatgcgctg
ttttacaataaacagtatgaaatcaatgagcgtctgcgcgatgacgcgctggaaaaagcc
gtcggcgctgacgttttatgccacgcatttgacgacagcctgctgctgccaccgggatcg
gttaccaccggcaataacgagatgtacaaagtctacacgccgtttcgtcgtgccttttta
tcccgcctgacggaatccgacagccgctccctgcccgcaccaaaagcgcgagagcacggg
cagaaaacggtgatgcataagctgatgccgttcgattatccgctggaaaacatcgacgag
aattttgctgtcggcgaagacgcggcgcgcaatcagttgcgcagtttttgccgtgagcag
gtgcaggattatcttcagcagcgcgatttacccgccgttgatggcaccagttcgctctcg
ccctatctggcgattggcgtgctttcgccacgtcagtgtttcaaccggctgcgcaccgaa
tgccctgacgtgctcgacagaactgacggcggcgcgtttggctggctgaatgagcttatc
tggcgcgagttttaccggcacctgatcgtcgcatggccgaaactctgcaaacatcagccg
tttgtcggctggaccgacggcgtgcactggcggcacgcgccggaagagttacaggcgtgg
aaagaggggaaaacaggctatccgatagtcgatgcggcgatgcgccagctcaacgccacc
ggctggatgcacaaccgtctgcgcatgatcgtcgccagttttctggtgaaggatttgctg
atcaactggcgcgaaggcgaacgctattttatgtcgcagctgctcgacggcgatctggcc
gctaacaacggcggctggcagtggggcgcgtcgacagggaccgacgccgcaccgtatttc
cgcattttcaatccgacaacgcagggcgaacgctttgacaaagcgggacgatttatcaag
gcctggatccctgaactgtcggacgtgccggaaaaagacatacacacaccgcatcgctgg
gcggaaaaacagcatcgcgtgctagactacccgttgccgatcattgatcacgcaagggca
cgcaaagacacgcttgcggcgtttgaggcggcaaaaaaccggtcagactga
DBGET
integrated database retrieval system
