Rahnella inusitata: I2123_18375
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Entry
I2123_18375 CDS
T09790
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
riu
Rahnella inusitata
Pathway
riu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I2123_18375 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riu03400
]
I2123_18375 (alkA)
Enzymes [BR:
riu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
I2123_18375 (alkA)
DNA repair and recombination proteins [BR:
riu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I2123_18375 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
DUF1707
Motif
Other DBs
NCBI-ProteinID:
QUT14607
LinkDB
All DBs
Position
complement(3915306..3916178)
Genome browser
AA seq
290 aa
AA seq
DB search
MTTMLLTYQPPYDWQWMTAFLGARALQGVEQQDGEFYQRTLAVKHNGERLTGWIRLRPLA
GQHSVELQVSPSLEPVADNVAQQVRRLLDLDAEPQQIAAGLGSLAENAIGLRLPGCVNRF
ELVVRAILGQLVSVKMAATLATRLTQRWGEPVSTPFAALTHLFPSPATVGQLTVDDLRGI
GVQAKRAACLIGLAQAVEEGRLPLDEMTDAQDSIKMLLAMPGIGSWTASYVAMRAWSAPD
VFLGGDYLIKQRFPGMTPGKIARYAEIWQPWRTYATLHLWFNNDWQPDMP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgactacaatgcttctgacctatcagccaccgtacgactggcagtggatgacggccttt
cttggcgcgcgcgctttgcagggcgtcgagcagcaggacggcgaattctaccagcgcacg
ctggcggtgaagcacaacggcgaacggctgaccggctggatcaggctgcggcctttagcc
ggacagcacagcgtcgagctgcaggtttcgccgtcgctggaacccgttgcggacaacgtt
gcgcagcaggtgcgacggttgctggatctggatgcagagccgcagcaaatcgccgccggg
ctaggttcactggcggaaaatgccatcgggctgagattgccaggctgtgtgaaccgtttt
gagctggtggtcagggcgatcctcgggcaactggtcagcgtgaaaatggcagcgacgctg
gccacgcggctgacgcagagatggggcgagccggtgagtacgccgtttgcggcactgacg
catctcttcccatcaccggcgactgtcgggcaactgacggtggatgatttgcgcgggatt
ggcgtgcaggcgaaacgcgcggcctgtctgatcgggctggcgcaggcggtggaagaaggg
cggttaccgctcgatgaaatgaccgatgcgcaggacagtatcaaaatgctgctggctatg
cccggcattggcagttggaccgccagttatgtggcgatgcgcgcctggtcagcgccggat
gttttccttggtggggattatctgatcaaacagcgttttccgggcatgacgccgggaaaa
atcgcccgctatgccgaaatctggcaaccgtggcgcacctacgccacgctgcatttatgg
ttcaacaatgactggcagccggacatgccttag
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