Rahnella inusitata: I2123_18905
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Entry
I2123_18905 CDS
T09790
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riu03400
]
I2123_18905 (sbcD)
DNA repair and recombination proteins [BR:
riu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I2123_18905 (sbcD)
Archaeal homologous recombinant proteins
I2123_18905 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QUT14708
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All DBs
Position
4033570..4034808
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AA seq
412 aa
AA seq
DB search
MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLTEQVEIHQADAVIVAGDIFDTGSPPSYAR
ELYNRFVVELQHTGCQLVVLAGNHDSVATLNESKELLSCLNTRVIATVGEDLSEQVLELN
HRDGSPGAVLCAIPFLRPRDLIASQAGQSGSDKQLALQEAIAAHYDALYKAAQAKRDQLG
VPLPIIATGHLTTVGVSTSDSVRDIYIGTLDAFPAQAFPPVDYVALGHIHRAQCVAKTHH
IRYSGSPIALSFDELGKAKSVFLLDFTGATLNSIDTLEIPVFQPMQMIKGSLAEIEKQLM
QFTDGDATKPVWLDIEVATQDYLSDIQRRIQTLTAELPVEVVLLRRSKEQRINSIEQQEK
ETLSELSVSDVFERRLSLEADADEQRQARMRTLFAQVVDEVTSGHHAEDAAQ
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacttcagactggcaccttggccagtatttctttaccaaaagccgc
gccgccgagcatcaggcttttctgcgctggctgacggaacaggtggaaattcatcaggca
gatgccgtgattgtggcgggcgatattttcgataccggctcgccaccgagctatgcgcgg
gaactgtataaccgcttcgtggtggaattacaacacaccggctgccagctggtagtgctg
gccggcaaccacgactctgtcgccacgctcaatgaatctaaggaactgctttcctgcctc
aatacccgcgtgatcgctaccgtcggtgaagacttgtctgagcaggttctggaattaaat
catcgggatggctcgcccggcgcagtgctgtgtgcgatcccgttcttacgcccgcgcgat
ttgatagccagtcaggctggtcagtccggcagcgacaagcagctggcattgcaagaagcc
atcgccgcccattatgacgctttatataaagcggcacaggcgaagcgtgaccagctcggc
gttccgctgcccatcatcgccaccggccatctgaccaccgtcggcgtcagcacctcggat
tcggtacgtgacatttatataggcaccctcgacgcctttccggcacaggcctttccgccg
gtcgattacgttgcactcgggcatattcatcgcgcccagtgcgtggcgaaaacccaccac
atccgctacagcggctcgccgattgcgctgagttttgacgaactcggcaaagccaaaagc
gtgtttttgctcgattttacgggtgcaacgcttaacagcatcgacacgctggaaattccg
gtatttcagccgatgcagatgatcaaaggctcgctggccgaaatagaaaaacaactgatg
cagtttaccgacggcgatgccacaaaaccggtctggcttgatattgaagtcgcgacgcag
gattacctcagcgacattcagcggcggatccagacgctgaccgccgaactgccggtggaa
gtcgtgctgctgcgccgcagtaaagaacagcgcattaacagcattgaacaacaggaaaaa
gaaaccctcagcgagctgagcgtgagcgatgtcttcgagcggcggctgtcgctcgaagcg
gacgccgacgaacagcgtcaggcgcggatgcgcacgctgttcgcgcaggtggtcgatgag
gtcaccagcggccatcacgcagaggacgccgcacaatga
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