KEGG   Rahnella inusitata: I2123_19615
Entry
I2123_19615       CDS       T09790                                 
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
  KO
K01581  ornithine decarboxylase [EC:4.1.1.17]
Organism
riu  Rahnella inusitata
Pathway
riu00330  Arginine and proline metabolism
riu00480  Glutathione metabolism
riu01100  Metabolic pathways
riu01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:riu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00330 Arginine and proline metabolism
    I2123_19615 (speF)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    I2123_19615 (speF)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    I2123_19615 (speF)
Enzymes [BR:riu01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.17  ornithine decarboxylase
     I2123_19615 (speF)
SSDB
Motif
Pfam: OKR_DC_1 OKR_DC_1_C OKR_DC_1_N Beta_elim_lyase CAGE1
Other DBs
NCBI-ProteinID: QUT14836
LinkDB
Position
complement(4181702..4183864)
AA seq 720 aa
MKLLKLAASTSVSPYLQTARLVADLRRADFADVAAIIISVGDLNHGRLAEIEKLGFGIPA
FVAVQGTEQVSPEFLPALKGVITLSDANQAFYGAQIESAAQAYEEALFPPFFDTLKKYVE
MENATFACPGHQGGEFFRRHPAGRQFYDFYGPNIFRSDMCNADVKLGDLLIHEGSAKDAQ
KYAAKVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPFGFIGGIDAACFDEDYLRNQIKQVAPDRAGEKRPFRLAIIQLGTYDGTVYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKECSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDNHIKGQKRHCSHKKLNNAFMMHASTSPFYPLFAALDVNARIHAGGSGKHM
WMECVKLGIETRKMLLEQCSMILPFVPPVVDGIAWQNHETEKMANDVRFFDFVPGERWHA
FSGYAEKQYFVDPCKLLLTTPGIDATTGKYTEFGIPATILANYLRENGIVPEKCDLNSIL
FLLTPAETPAKMQLLVEEIARFEQYIEEDAPLSEVLPTVYRKNEDRYRNYTIRQLCQEMH
NLYVSFDVKELQKEMFREKSFPQVVMNAQDAHNEFIRDNIELVPIGEAEGRIAAEGALPY
PPGVLCVVPGELWGGAVQRYFMALEEGINLLPGFSPELQGVYIEKKPVGWKRVMGYVIAV
NT seq 2163 nt   +upstreamnt  +downstreamnt
atgaaacttttaaaacttgcagcaagcacctccgtttccccctatctccagaccgcgcgt
ctggtggctgacctgcgtcgcgctgattttgccgacgtcgccgccatcattatctccgtc
ggggatttgaaccacggcaggctggcggaaattgaaaagctggggtttggtattcccgcg
tttgtcgctgtgcagggaaccgagcaggtttcgcctgagtttttaccggcgctgaaaggg
gtgatcaccttatcggacgccaatcaggcgttttatggcgcgcagattgaatccgcggcg
caggcctatgaagaagctttgttcccgccgtttttcgacacgctgaaaaaatatgtcgaa
atggagaacgccaccttcgcctgccctgggcatcagggcggtgagtttttccgtcgccat
ccggcagggcgtcagttttatgatttctacggcccgaatattttccgctctgacatgtgc
aatgccgacgtcaagctgggcgatttgctgatccatgaaggctcggcgaaagatgcgcaa
aagtatgccgccaaagtctttaacgcggataaaacttatttcgttctaaacggcacgtcg
gcggcgaataaagtggtgaccaatgcactgctgacccgaggcgatttggtgctgttcgac
cgtaacaaccacaaatctaatcaccacggcgcactgctccaggcgggcgcgacgccggtg
tatcttgagacggcgcgtaacccgttcggctttatcggcggtatcgatgctgcgtgtttt
gacgaagattatttgcgcaatcaaatcaaacaggttgcgccggatcgcgccggtgagaag
cgtccgttccgcctggcgattattcagctcggcacctacgatggcaccgtttacaacgcg
cgtcaggtggtcgataaaatcggacacctgtgcgattacatcctgtttgactccgcatgg
gtcggctacgagcaattcatcccgatgatgaaagagtgctcgccactgttgctggagctg
aacgagaacgatcccggcatcattgtcacgcagtcagtgcacaagcagcaggctggcttc
tctcagacgtcgcaaatccacaaaaaagataaccatatcaaaggccagaagcgccattgc
agccataaaaagctcaataatgctttcatgatgcacgcctccaccagcccgttttatccg
ctgtttgccgcgctggatgtcaatgcgcgtatccacgcgggcggcagcggtaaacatatg
tggatggaatgcgtgaagctcggtatcgaaacccgcaagatgctgctcgaacagtgctcg
atgattctgccgttcgtgccgccggttgttgacggtatcgcctggcagaaccatgaaacg
gagaaaatggccaatgacgtgcgcttcttcgatttcgtgccgggtgagcgctggcatgcc
ttctccggctatgccgagaagcagtattttgtcgacccgtgcaaactgctgctgaccacg
ccgggcattgatgcaacgaccggtaagtacaccgaattcggcattccggcgaccattctg
gcgaactatctgcgagaaaacggcattgtgccggagaagtgcgatctgaactcgatcctg
ttcctgctgacgccggcagaaacaccggccaaaatgcagttgctggtcgaggaaattgcg
cgttttgagcaatatatcgaagaagatgcgccactcagcgaagtgctgccgacggtgtat
cgtaaaaatgaagatcgttatcgcaattacaccatccgccagctgtgccaggagatgcat
aacctgtacgtcagttttgacgtcaaggaactgcaaaaagagatgttccgcgagaagagc
ttcccgcaggtggtgatgaacgcgcaggatgcgcataacgagtttatccgcgacaacatt
gagctggtgccgattggtgaagcagaaggccgtatcgccgcagaaggcgcgctgccttat
cctccgggcgtactctgcgtggtgccgggcgaactgtggggcggcgcggtgcagcgttac
ttcatggcgctggaagagggcatcaatctgctgccaggcttctcccctgagttgcagggc
gtttatatcgagaagaaaccggtcggctggaaacgcgtgatggggtacgtgatagcggtg
taa

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