KEGG   Rahnella inusitata: I2123_19920
Entry
I2123_19920       CDS       T09790                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
riu  Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:riu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:riu03016]
    I2123_19920 (thpR)
Enzymes [BR:riu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     I2123_19920 (thpR)
Transfer RNA biogenesis [BR:riu03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    I2123_19920 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: QUT14891
LinkDB
Position
4254674..4255216
AA seq 180 aa
MSAERRLFFALSLPAKLQKQVIKWRAECFPQDTGRPVAAANLHITLAFLGEISELKAEAL
IRVAGRIQAQKFSMHLDDIGHWPGSGVVWIGAKRAPNALLQLASVLRSHAARNGCHQSAL
PFHPHVSLYRNATRPVAIPPATPQWLLEADAFSLYESTYERGRTRYRCLRTWPLADASAL
NT seq 543 nt   +upstreamnt  +downstreamnt
atgtctgccgaacgccgcttgtttttcgctttatcactgcccgcaaagctgcaaaagcag
gtgataaagtggcgcgcagagtgtttcccgcaggatactggccgccctgtcgcggcggca
aacctgcacattacactggcatttttaggcgaaatcagcgagctaaaggccgaggcgctg
atccgcgtcgccgggcgtatccaggcgcaaaagttcagcatgcacctcgacgatatcggg
cactggccgggctccggcgtggtgtggataggcgcaaagcgtgcacctaacgcgctcttg
cagctggcgtcggtgctgcgctcccacgccgcgcgcaacggatgtcatcaaagcgcgctg
ccgtttcatccgcacgtttcactgtaccgcaacgccacgcgcccggtcgccattccccct
gcgacgccacaatggctgctggaggccgacgcattcagcctttatgaatccacgtatgaa
cgagggcgtacgcgctatcgctgcctgcgcacctggccattggctgatgcctctgccctt
taa

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