Rahnella inusitata: I2123_19940
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Entry
I2123_19940 CDS
T09790
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
riu
Rahnella inusitata
Pathway
riu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I2123_19940 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
riu03019
]
I2123_19940 (pcnB)
Enzymes [BR:
riu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
I2123_19940 (pcnB)
Messenger RNA biogenesis [BR:
riu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I2123_19940 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QUT17509
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All DBs
Position
4257642..4259390
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AA seq
582 aa
AA seq
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MFQSLSRCTIFTRVANFCRKVLVREDKVIREEKAVHDDAALHGEVNREETPRRDPSPVAE
GNVKAKNPERRDNDQRRENRGRREDNANRGERRNNNNRRSTPYQPRGERNDQRGERSEQR
APVEHVQKPRPSFDYAGETRAITIVPRDEHNISRRDISENALKVLYRLNKSGFEAFLVGG
GVRDLLLDKKPKDFDITTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHH
EQYEETDDKNVSQQAQNGMLLRDNIFGSIEDDAQRRDFTINSLYYGVADFTVRDYTGGLR
DLQNGIIRLICDPETRYREDPVRMLRAVRFAAKLDMKISPETAEPIPRLATLLQEIPPAR
LFEESLKLLQAGYGYATYQKLCEYQLFQPLFPLIARQFTEAGDSPMEHILLQVLKNTDHR
LQNDQRVNPAFLFAAMLWYPVIEHAQKLAQEGGLTYYDAFSLAMNDVLDEQCRTLAIPKR
ITTLVRDIWALQLRLSRRQGKRAHKLMEHPKFRAAFDLLALRAEVEQHRELQSLTEWWSE
FQEATPASQKTMLGTLGEDAVPARRARTRRPRKRAPRKESGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atttttcagtcactatcgaggtgtaccatttttacccgagtagccaatttttgccgtaag
gtgctagttcgtgaagataaagtcattcgtgaagaaaaggctgttcatgacgacgccgcc
cttcatggagaagtgaatcgcgaagagaccccacgtcgtgatccttcacccgtggctgaa
ggcaatgtgaaggcaaaaaatcctgaacgtcgtgacaacgatcaacgccgtgaaaaccgc
ggccgtcgggaagacaatgcgaaccggggtgagcgccgtaacaataacaatcgccgctcc
acgccttatcagcctcgcggcgaacgcaacgatcaacgcggtgagcgcagtgaacaacgc
gctcctgtcgaacacgtacagaaaccccgcccgtcatttgactatgccggtgaaacccgt
gcgatcaccattgttccgcgtgacgagcacaacatttcccgtcgtgatatcagcgaaaat
gcgctgaaagttttatatcgcctgaacaaatctggcttcgaagccttcctggtcggcggc
ggtgtccgcgatttactgctggacaaaaagccgaaagatttcgatatcaccaccaacgct
acgccggatcaggtacgtaaactgttccgcaattgccgtctggtcggtcgccgcttccgt
ctggcgcacgtcatgtttggcccggaaatcatcgaagtcgccaccttccgcggacatcac
gagcagtacgaagaaaccgacgataaaaacgtgtctcagcaggcccagaacggcatgctg
ctgcgcgataacattttcggcagcattgaagacgacgcccagcgccgtgacttcaccatc
aacagcctctattacggggtagccgactttaccgtacgcgattacaccggcggtctgcgt
gatctgcaaaacggcattatccgcctgatttgtgacccggaaacccgctaccgcgaagat
ccggtgcgtatgctgcgcgccgtgcgtttcgcagccaagctggacatgaaaatcagcccg
gaaaccgccgagccgatccctcgtctggcgacgctgttgcaggaaatcccgccagcgcgt
ctgttcgaagaatccctgaaactgttgcaggccggttacggttacgcgacgtatcagaag
ctgtgcgaataccaactgttccagccgttgttcccgctgattgcccgccagtttactgag
gccggtgacagcccgatggaacacatcctgttgcaggttctgaaaaacaccgatcaccgt
ttgcaaaacgatcagcgcgtcaatccggcgttcctgttcgcggcaatgctgtggtatccg
gtgattgagcatgcgcagaagctggcgcaggaaggtggtctgacatattacgacgctttc
tctctggcgatgaacgacgtgctcgacgaacagtgccgtacgctggccattcctaaacgt
atcaccacgctggtgcgtgatatctgggccttgcagctgcgtctgtcacgccgtcagggt
aaacgcgcgcacaagctgatggaacatcctaagttccgcgcggcgtttgatttactggca
ctgcgtgccgaagtcgaacagcatcgcgaactgcaaagcctgaccgaatggtggagcgag
ttccaggaagcgacgcctgcttcccaaaagaccatgctcggcaccttaggtgaagatgcg
gtgcctgcgcgccgtgcccgcacccgtcgcccgcgcaaacgggctccgcgtaaggaaagc
ggtcaatga
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