Rahnella inusitata: I2123_20340
Help
Entry
I2123_20340 CDS
T09790
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
riu03021
]
I2123_20340 (rapA)
Transcription machinery [BR:
riu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
I2123_20340 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QUT14965
LinkDB
All DBs
Position
4351525..4354422
Genome browser
AA seq
965 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDVRMVTLLFPATGENRLYARNDSPITRVMFNTGDT
ISCHEGWQLQVEEVIEDKGLLTYIGTRLDTEETGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQREQFRLEFGGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLSGRAERVLIVVPETLQHQWLVEMLRRFNLHFSLFDDDRYAESVH
EATNPFETEQLVICSLDFVRRNKSRLEQLSDASWDMLVVDEAHHLVWSEDAPSREYQVIE
QLSQQIPSVLLLTATPEQLGQESHFARLRLLDPDRFHDYEEFIEEQQQYQPVADAVTLLL
NKEPLTPEALALLGESVGNADTDALLTAANQGDEAAAKQLVSMLMDRHGTSRVLFRNTRN
GVKGFPDRHLHAVKLPLPTQYQTAIKVSGIMGAKKSAEARAHDMLYPEQIYQEFEGENAT
WWNFDPRVEWLLGYLTANRDEKVLVICAKAATALQLEQVLREREAIRAAVFHEGLSIIER
DRAAAYFASQEDGAQVLLCSEIGSEGRNFQFASKMVMFDLPFNPDLLEQRIGRLDRIGQQ
NNIDIMVPYLEQTAQSVLVRWFHEGLDAFEHTCPTGRTIYDSAYEQLIAFLATPAEQEGL
DTFILECRAEHDALKEKLENGRDRLLEMHSNGGERAQQLAQEIGEQDNDVNLVNFALNLF
DIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPEDGCTVTFDREQALSREDAQFISWEHPI
VRNGLDLILSGDTGSCAVSILKNKALPVGTMLAELIYVVECQAPKHLQLTRFLPPTPVRM
LMDSKGTNLAAQVEFESFNRQLNAINRHNSSKLVNAVQQDVHTMLQQAEPQIAEQARVLI
EAAKVEADEQLTQELARLKALKEVNPNIRDDELDAVDSNRKQVLANLNDASWRLDAIRLV
VVSHQ
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttacattgggtcaacgctggataagcgatacggaaagcgaattaggattaggc
accgtggttgcaatagatgtgcgcatggtgactttgcttttccccgccaccggtgaaaac
cgtttgtatgcccgaaatgattccccgatcacccgcgtgatgttcaataccggtgatacc
atcagctgccacgaaggctggcagctgcaagtcgaagaagtcattgaagataaaggtctc
ttgacctatatcggcacccgtcttgatacagaagaaaccggcgtcgcgatgcgcgaagtg
ctgctcgacagcaagctgaccttcagcaagccgcaggatcgcctattcgccggccagatc
gaccgcatggatcgtttcgccctgcgctttcgtgcccgtaaatatcagcgcgaacagttc
cgtctggaattcggcggcctgcgcggtatgcgcgccagcctgatcccgcatcagttacac
attgcttatgaagtcggtcagcgtcatgcgccacgcgttttactggccgatgaagtgggt
ctggggaaaaccatcgaagcggggatgatcatccatcagcaactgctgtcaggccgcgcc
gaacgcgtgctgatcgtggtaccggaaacactgcaacaccagtggctggtcgaaatgctg
cgccgcttcaacctgcacttctccctgtttgatgacgatcgctacgcggaatccgttcac
gaagcgactaacccgtttgaaaccgaacagctggttatctgctcgctggacttcgtacgc
cgcaacaaatctcgtctggagcagctgtccgacgcgtcatgggacatgctggtagtcgat
gaagcgcaccatctggtgtggagcgaagacgcgccgagccgcgaatatcaggtgatcgaa
cagctttcacaacaaatcccaagcgtgctgttgctgaccgcaacgccggaacagctcggg
caggagagccactttgcgcgcctgcgtttgctcgatccggatcgtttccacgattacgaa
gaattcatcgaagagcagcagcagtatcagccagttgccgatgcggtcacgctgctgctc
aataaagaaccgctgacgccagaagcgctggctttactgggtgaaagcgtcggcaatgcc
gataccgatgccctgctgaccgccgccaatcagggcgacgaggctgcagctaaacagctg
gtttccatgctgatggaccgccacggcaccagccgcgtgctgttccgtaacacccgtaac
ggtgtgaaaggcttcccggatcgtcatctgcacgcggtgaaattgccgctgccgacgcag
tatcagaccgcgattaaagtctcaggcatcatgggcgcgaaaaaatccgccgaagcgcgt
gcgcacgacatgctctatccggagcagatttatcaggaattcgaaggcgagaatgcgacg
tggtggaacttcgacccgcgtgtggaatggctgctcggctatctgaccgccaaccgcgac
gaaaaagtgctggttatctgtgccaaagccgccactgcgctgcaactggagcaggttctg
cgcgagcgtgaagcgatccgtgctgccgtgttccatgaaggtttgtccatcatcgaacgc
gaccgcgccgccgcgtactttgcgtcgcaggaagatggcgcacaggttctgctgtgttct
gaaatcggctccgaaggccgtaacttccagttcgccagtaaaatggtgatgttcgatttg
ccgttcaacccggatctgctcgaacagcgtattggccgcctggatcgtatcggtcagcaa
aacaacatcgacattatggtgccttacctcgagcagaccgcgcagtcggtgctggttcgc
tggttccacgaaggtctggatgcatttgagcatacctgcccgaccggccgcaccatttat
gacagcgcttatgaacagctgatcgctttcctcgccacgcctgccgagcaggaaggtctg
gatacgtttatccttgaatgccgcgctgagcacgatgcgctgaaagagaagctggaaaat
ggtcgcgatcgtctgctggagatgcattccaacggcggcgaacgtgcgcagcaactggcg
caggaaatcggtgagcaggataacgacgtgaatctggttaacttcgcgctgaatctgttc
gatatcgtcggcatcaatcaggaagatcgcagcgataacctgatcgtactgacaccttcc
gatcacatgctggtgccggatttcccaggtctgccggaagatggctgcactgtgacgttc
gatcgcgaacaggcgttgtcgcgcgaagatgcgcagttcatcagctgggaacatccgatt
gtgcgcaacggtttggatctgatcctctccggtgataccggcagctgtgcggtgtcgatc
ctaaaaaacaaagcgttgccggtaggcaccatgctggcagagctgatttacgtggtggaa
tgtcaggcaccaaaacacctgcagcttacccgcttcctgccgccgacgccggttcgcatg
ttgatggacagtaaaggcaccaatctggctgctcaggtcgagtttgaaagctttaaccgc
cagttgaacgccatcaaccgtcataactccagcaagctggtgaatgccgtacagcaggat
gtgcataccatgctgcaacaggcagaaccgcagattgccgaacaggcgcgggtgctgatt
gaagccgccaaagtagaagccgacgagcaactgacgcaggaactcgcccgactgaaagcg
ctgaaagaagtgaacccgaacattcgtgacgatgagctggacgcggtagactccaaccgt
aagcaagtgctggcaaacctgaacgatgccagctggcgtctggatgcgatccgcctggtg
gtggtcagccaccagtaa
DBGET
integrated database retrieval system
