Rahnella inusitata: I2123_20485
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Entry
I2123_20485 CDS
T09790
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
riu03000
]
I2123_20485 (nhaR)
Transcription factors [BR:
riu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I2123_20485 (nhaR)
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QUT14991
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Position
complement(4388410..4389300)
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AA seq
296 aa
AA seq
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MPHINYNHLYYFWHVCKSGSVVGAAEALYLTPQTITGQIKSLEERLGGKLFKRQGRGLVP
SELGQLVYRYADKMFTLSQEMLDIVNYRKESSLLFDVGVADALSKRLVSRVLKAAVPDNA
QIHLRCFESTHEMLLEQLSLHKLDMILSDCPVDSTQQEGLFSVKLGESPISFYCCNPPAG
VDFPACLEQRPLLIPGRRSMLGRKLLNWFNTQGLKVNILGEFDDAALMKAFGMNNDAIFV
APAIYSSTEFQDEKIVEVGRVEGILEEYYVIFAERMIQHPSVQRICHTDFSALFEL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatattaactacaaccatttgtattatttttggcacgtctgtaaatcaggttct
gtcgtaggtgccgccgaggcgctctatctgacgccacagaccatcaccgggcagattaaa
tcgcttgaggaacggttaggtggcaaacttttcaaacgtcagggccgcggtctggtgccc
tctgagctggggcagctggtatatcgctatgccgataagatgttcaccctcagtcaggaa
atgctggatatcgttaactatcgcaaagagtcgagcctgttgtttgacgtgggtgttgcc
gatgcgctgtcgaaacggctggtcagccgtgtgctgaaagctgccgtgccggacaacgca
caaattcatttgcgatgttttgaatccacccacgaaatgctgctggaacagctgagcttg
cataagctggatatgattctgtcggactgcccggtggattcaacgcagcaggaaggtttg
ttctccgtcaagctgggcgagagtccgatcagcttctattgctgcaatccccctgcgggt
gtcgattttcctgcttgtctggagcagcgtccgctgctgatccccgggcgtcgttcgatg
ctgggacgaaaattgctgaactggtttaatacgcagggattgaaagtgaacattctcggt
gagttcgatgatgcggcactgatgaaagcgttcgggatgaacaacgatgcaatatttgtc
gcgccagcgatttactcttctactgagtttcaggatgaaaaaattgttgaagtggggcgc
gtggaggggattctggaagagtactacgtgatttttgccgaacgtatgatccaacatcct
tcggttcagcggatttgtcacactgacttttcggcgctgtttgagttgtag
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