Rahnella inusitata: I2123_21615
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Entry
I2123_21615 CDS
T09790
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
riu03019
]
I2123_21615 (csrD)
Messenger RNA biogenesis [BR:
riu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I2123_21615 (csrD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
QUT15204
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All DBs
Position
complement(4639712..4641646)
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AA seq
644 aa
AA seq
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MRFTTRLSALISMLVALAMLLMLLGVTFSFIYLNKQNTEQHLQALTTTYDQALLTQSPEQ
AQRWLPQAMRMLDVTDIVVKLNSSTVYEYHERPDLHRSWDSVMPEYNTAIYPLMQHPDMS
LHVSYIDPVSSYIRSMRSTLTISVAILIMFGMVLLSFRWLRQETDGVEKLEDRAIRILRG
EREGLTGNLGEWPHSASSAIDLLLTDLNEAREQRSRVDTLIRAYAQQDSQTGLSNRLFFD
NQLATQLEEEGTHGVIMLLRLPDFDLMRETHGQAMVDELRSAMVNLLSTFVMRHVDALLA
RYFHSDFAVLLPHRTLKEAEVMAAQLVNALGVLPTSSLIDRDALMYIGISAYRFGQTPDQ
VMDMVQQATRHAAFQGSNSWFIFDNNVPEKGRGSVRWRTLLENTLARGGPRLYQKPAFSR
NGKLDHRELQRRVFDGENELLAAEFVPLVVQFGLSQSYDRIMISQIIPLLNRWPDETLAF
HLTVDSLLQRSFVRWLRDTLLQCERLQRNRILIELAEADLCQHTDRLRPAIRLLQGLGCR
LAVSQAGLTVVSTSYLKTFPVERVKLHPGLVRDIDKRIENQLFVQSLLSACEGTQALVFA
SGVRTKDEWSILLSKGIHGGQGDFFAGPEPVEPVGKKYSHNSDV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttactacccgactctcagcactgatttcgatgttagttgcgctggcaatgttg
ttgatgttgctcggcgtgacctttagttttatctatctgaataagcaaaacacagagcaa
catcttcaggcactgacgacgacctatgaccaggcgctgctgacccaatctcccgaacaa
gcgcagcgctggctgccgcaggcgatgcgcatgctggacgtcaccgatattgtggtgaaa
ctcaacagctccactgtgtacgagtaccacgaacgtccggatttacaccgctcgtgggac
agcgtgatgcctgaatacaacacggccatttaccctctcatgcaacaccccgatatgtcg
ctgcatgtgtcttatattgaccccgtcagcagttacatccgttccatgcgctcgacgctc
accatcagtgtggcgatcctgattatgttcggcatggtattgctcagttttcgctggctg
cgacaggaaaccgatggcgttgagaagctggaagatcgcgcgatacggattttacgcggt
gagcgcgagggactgaccggaaatctgggcgaatggccgcattccgccagcagcgccatt
gatctcctgctgaccgatcttaatgaagcccgcgagcagcgcagccgcgttgatactctg
atccgcgcctacgcccagcaggattcacaaaccgggctcagtaaccgcttgttctttgat
aatcagctggcgacgcagctggaagaagagggcacacatggtgtgatcatgctgctgcgc
ctgcctgatttcgacctgatgcgtgaaactcacggtcaggcgatggtcgatgagttgcgc
tccgcgatggttaatctgctctcaacctttgtgatgcgccacgttgatgccttactggcg
cgttacttccacagtgattttgccgttctgctgccacaccggacgctcaaagaagctgaa
gtgatggcggcgcagctggtcaatgcgctcggggtattaccgacgtcgtcgctgattgat
cgcgatgccctgatgtacatcggcatcagcgcctatcgttttggccagacgccggatcag
gtaatggatatggttcagcaggcaacgcgtcacgcggcgttccagggcagcaacagctgg
tttattttcgacaataatgtgcctgagaaagggcgcggcagcgtgcgctggcgaacctta
ctggaaaatacactggcgcgcggcgggccgcgtttgtatcagaaaccggccttctcccga
aatggtaaactcgatcatcgtgaattacagcgccgcgtcttcgacggggagaatgagttg
ctggccgcagagtttgtgccactggtcgtgcagttcggtctttctcaaagttacgaccgc
ataatgataagtcagattattccgttacttaaccgctggccggacgaaacgttggcattt
cacctgacggttgattcattattgcagcgctcatttgttcgctggctgcgcgatacgctg
cttcagtgtgaaagattacagcgaaatcggattttgattgaacttgctgaggcagatctt
tgtcaacataccgaccgcctgcgtcctgcgattcgtttattgcaaggtttaggctgtcgt
ctggcagtttcacaggccggtctgacggtggtcagtacctcttatctgaaaaccttcccg
gtggaaagggtcaaacttcatccgggtctggtgcgcgatatagataaaagaattgaaaat
cagctgtttgtacaaagcctgctcagtgcatgtgaagggactcaggctctggtctttgcc
tccggcgtgcgaacaaaggatgagtggtcgatcctgctgagtaaggggatccacggtggc
cagggtgatttttttgccggaccggagcccgttgaaccggttggtaaaaaatattcacac
aacagcgatgtttaa
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