Rahnella inusitata: I2123_22825
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Entry
I2123_22825 CDS
T09790
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
riu
Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
I2123_22825 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
riu02044
]
I2123_22825 (tssC)
Secretion system [BR:
riu02044
]
Type VI secretion system
Imp/Vas secretion system core components
I2123_22825 (tssC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VipB
VipB_2
DUF1340
Motif
Other DBs
NCBI-ProteinID:
QUT17926
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All DBs
Position
unnamed1:220474..222021
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AA seq
515 aa
AA seq
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MLMSVNTENTQESRTTVLERADAGSVYASLFEKINLTPVASLGDVNIFQDNQAMSDVTTD
ERVTAAVQVFLERLKLSGQKVERLDKTLLDGHIAMLDDQISRQLDEVMHHPDFQRVESGW
RGLKFLVDRTDFRQNVKIELLDVSKDDLRQDFEDCPEIIQSGLYRHAYIQEYDTPGGEPI
GSVISNYEFDASAQDIALLRNISKVSAAAHMPFVGSVGPAFFLKDSMEEVAAIKDIGNYF
DRAEYTKWKSFRDSDDARYIGLTMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWT
NAAFAFAANMVKSFIKNGWCVQIRGPQAGGAVTDLPIHLYDLGTGNQVKIPSEVMIPETR
EFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIA
HYLKLIQRENIGTTKDRRLLELELNTWIRTLVTEMTDPGDDLQASHPLRDAKVTVEDIED
NPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgtctgtgaacacagaaaatacgcaagaaagccgcacaaccgtgctggaacgt
gccgacgcaggaagtgtttatgcgtctttgtttgaaaaaatcaatctgaccccggtcgcc
tctctgggcgacgtcaatatcttccaggacaatcaggcgatgtctgatgtcaccaccgac
gaacgcgtcaccgcggcagttcaggtgttccttgagcgcctgaaactctcaggtcaaaaa
gtcgaacgtctggataaaaccctgctggacggtcacatcgccatgctcgacgatcagatc
agccgtcagctggacgaagtgatgcaccacccggattttcagcgcgtggagtctggctgg
cgtggcctgaagttcctggtcgaccgcaccgattttcgtcaaaacgtgaaaatcgagttg
ctggacgtctccaaagacgacctgcgtcaggatttcgaagattgccctgaaatcatccaa
agcggcctgtaccgtcacgcttacattcaggaatatgacacgccgggcggcgagccgatt
ggttctgtgatttccaactacgagtttgatgccagcgcacaggacatcgcgctgctgcgc
aacatttctaaagtgtccgctgccgcgcacatgccgttcgtcggctccgtcggccccgca
ttcttcctgaaagattctatggaagaagtggctgcgattaaagacatcggcaactacttt
gaccgcgcagaatacactaagtggaaatccttccgcgactctgatgacgcccgctatatc
ggcctgaccatgccgcgcgtgctcggtcgtctgccttacggcccggacaccgtaccggta
cgcagcttcaactacgtcgaagaagtgaaaggtccggatcacgagaaatatctgtggacc
aacgccgcgttcgctttcgccgccaacatggtgaaaagcttcatcaagaacggctggtgc
gtgcaaatccgtggcccgcaggccggcggcgcagtgaccgatctgccaatccacctgtat
gatctgggcaccggcaatcaggtgaaaattccgtccgaagtcatgatcccggaaacacgc
gagtttgagtttgccaacctgggcttcatcccgctgtcttactacaaaaaccgcgactat
tcctgcttcttctctgctaactccgcgcagaaacccgccctgtacgacaccgctgatgcc
acggccaacagccgcatcaatgcgcgtctgccgtacatcttcctgctgtcgcgcatcgcg
cattacctgaaactgattcagcgcgaaaacatcggtacgaccaaagaccgccgcctgctg
gagctggagctgaacacctggatccgcacgctggtcaccgaaatgaccgatccgggcgat
gacctgcaagcctctcacccgttgcgcgatgccaaagtgaccgtagaagatatcgaagac
aaccctggcttcttccgcgtgaaactgtacgccgtaccgcatttccaggtcgaaggcatg
gacgtgaacctgtcattggtttctcagatgcctaaagcgaaagcttaa
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