KEGG   Rahnella inusitata: I2123_22825
Entry
I2123_22825       CDS       T09790                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
riu  Rahnella inusitata
Brite
KEGG Orthology (KO) [BR:riu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:riu02044]
    I2123_22825 (tssC)
Secretion system [BR:riu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   I2123_22825 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QUT17926
LinkDB
Position
unnamed1:220474..222021
AA seq 515 aa
MLMSVNTENTQESRTTVLERADAGSVYASLFEKINLTPVASLGDVNIFQDNQAMSDVTTD
ERVTAAVQVFLERLKLSGQKVERLDKTLLDGHIAMLDDQISRQLDEVMHHPDFQRVESGW
RGLKFLVDRTDFRQNVKIELLDVSKDDLRQDFEDCPEIIQSGLYRHAYIQEYDTPGGEPI
GSVISNYEFDASAQDIALLRNISKVSAAAHMPFVGSVGPAFFLKDSMEEVAAIKDIGNYF
DRAEYTKWKSFRDSDDARYIGLTMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHEKYLWT
NAAFAFAANMVKSFIKNGWCVQIRGPQAGGAVTDLPIHLYDLGTGNQVKIPSEVMIPETR
EFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIA
HYLKLIQRENIGTTKDRRLLELELNTWIRTLVTEMTDPGDDLQASHPLRDAKVTVEDIED
NPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgctcatgtctgtgaacacagaaaatacgcaagaaagccgcacaaccgtgctggaacgt
gccgacgcaggaagtgtttatgcgtctttgtttgaaaaaatcaatctgaccccggtcgcc
tctctgggcgacgtcaatatcttccaggacaatcaggcgatgtctgatgtcaccaccgac
gaacgcgtcaccgcggcagttcaggtgttccttgagcgcctgaaactctcaggtcaaaaa
gtcgaacgtctggataaaaccctgctggacggtcacatcgccatgctcgacgatcagatc
agccgtcagctggacgaagtgatgcaccacccggattttcagcgcgtggagtctggctgg
cgtggcctgaagttcctggtcgaccgcaccgattttcgtcaaaacgtgaaaatcgagttg
ctggacgtctccaaagacgacctgcgtcaggatttcgaagattgccctgaaatcatccaa
agcggcctgtaccgtcacgcttacattcaggaatatgacacgccgggcggcgagccgatt
ggttctgtgatttccaactacgagtttgatgccagcgcacaggacatcgcgctgctgcgc
aacatttctaaagtgtccgctgccgcgcacatgccgttcgtcggctccgtcggccccgca
ttcttcctgaaagattctatggaagaagtggctgcgattaaagacatcggcaactacttt
gaccgcgcagaatacactaagtggaaatccttccgcgactctgatgacgcccgctatatc
ggcctgaccatgccgcgcgtgctcggtcgtctgccttacggcccggacaccgtaccggta
cgcagcttcaactacgtcgaagaagtgaaaggtccggatcacgagaaatatctgtggacc
aacgccgcgttcgctttcgccgccaacatggtgaaaagcttcatcaagaacggctggtgc
gtgcaaatccgtggcccgcaggccggcggcgcagtgaccgatctgccaatccacctgtat
gatctgggcaccggcaatcaggtgaaaattccgtccgaagtcatgatcccggaaacacgc
gagtttgagtttgccaacctgggcttcatcccgctgtcttactacaaaaaccgcgactat
tcctgcttcttctctgctaactccgcgcagaaacccgccctgtacgacaccgctgatgcc
acggccaacagccgcatcaatgcgcgtctgccgtacatcttcctgctgtcgcgcatcgcg
cattacctgaaactgattcagcgcgaaaacatcggtacgaccaaagaccgccgcctgctg
gagctggagctgaacacctggatccgcacgctggtcaccgaaatgaccgatccgggcgat
gacctgcaagcctctcacccgttgcgcgatgccaaagtgaccgtagaagatatcgaagac
aaccctggcttcttccgcgtgaaactgtacgccgtaccgcatttccaggtcgaaggcatg
gacgtgaacctgtcattggtttctcagatgcctaaagcgaaagcttaa

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