Rahnella inusitata: I2123_23400
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Entry
I2123_23400 CDS
T09790
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
riu
Rahnella inusitata
Pathway
riu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
riu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I2123_23400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
riu02000
]
I2123_23400
Transporters [BR:
riu02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
I2123_23400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IDEAL
Glyco_hydro_42M
Motif
Other DBs
NCBI-ProteinID:
QUT17565
LinkDB
All DBs
Position
unnamed1:complement(344328..345974)
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AA seq
548 aa
AA seq
DB search
MNTGTPLGAWILALLLTVSGGAVQAKTPPDQLLIGMNMNNLLTLDPAAMTGNDIVGIVVN
LYDPLIELDPQELTNVRPALATSWEVNDARDLITFHLRDGVKFHSGNPVTAEDLVWSMRR
ILHLNLAQASVWKSYGFTKKNVDEMVRTPSPGIVEIQLPKPNDPKLVIYSLAALGSVVAL
DSKTVKAHEVNGDWGNRWLTTNEAGSGPFRLDSWQAKDVLNMSRNPQYWRGEPRLTRVVF
RHFQESQTLRLMIEKGDLDIANNMAVSDVTALSHDPAMTVDTVKKGTIYYVAMSMKEPHF
ANPKVREAVRYLIDYQGIGKALMTGYGIVHQRPIQVGMPATLPDPGYRLDIPRAKALLAE
AGYPDGFDTTLRVLADQPFLNIAIAVQSTLMQAGIRAKIVTGTGNQIYGAMRERKFDMLV
GRGGSGVEPHPHSSLRALVYNPDNNDAARLTNFQGWRTGFYDKQLNTDIDQALLERDPEK
QKQDYFAIQERYDALIPALVPLSQMVDSIVVRKDVKNYLPHPSATTFLRDVYKDESQATA
PSAGGKGL
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaggcacacccctcggggcgtggatcctcgcgctcctgctcacggtgagcggc
ggggcggtacaggcgaaaacgccccccgaccagctgcttatcggcatgaacatgaacaac
ctgctgacgctcgatccggccgccatgaccggcaatgacatcgtcggcattgtggtgaat
ctctatgacccgctgattgaactggatcctcaggagctgaccaacgtccgtccggcgctg
gcgacctcctgggaggtcaacgatgcccgggatctgatcacatttcatctgcgcgacggc
gtgaaattccactccggaaatccggtcacggcagaagatctggtgtggtcgatgcgccgc
atccttcatctgaatctggcgcaggcatcggtatggaaatcttacggcttcaccaaaaag
aatgtcgatgagatggtgcgcacgccgtcgccgggtattgtcgaaattcagcttcccaaa
cccaatgacccgaaactggtgatttactcgctggccgcgctgggcagtgtggtggcgctg
gacagtaaaaccgtcaaggcgcatgaagtgaatggcgactggggcaaccgctggctgacg
accaacgaagccggttcggggccgtttcgcctcgacagctggcaggcaaaagacgtgctg
aacatgagccgcaatccgcagtactggcgcggtgagccgcgtcttacccgcgtagtgttc
cgtcattttcaggaatcccaaactctgcgcctgatgatcgaaaagggtgatctggacatt
gccaataacatggcggtttccgacgtcaccgcgttaagccacgatccggcgatgaccgtc
gacacggtgaaaaaaggcaccatttattacgtggcgatgagcatgaaggaaccgcacttt
gccaacccgaaagtgcgcgaggcggtacgctatctgattgattatcagggtatcggcaaa
gcgctgatgaccggttacggcattgtgcatcagcgtccgattcaggtcgggatgcccgcg
acgttgccggacccgggctacaggctggatatcccacgcgccaaagccttgctggcagaa
gccggttacccggacggttttgacaccacgttgcgggtactggccgatcagcccttcctc
aacattgccattgccgtccagtccacgctgatgcaggcgggcattcgcgcaaaaatcgtt
accggcaccgggaaccagatttacggcgcaatgcgcgaacgaaaattcgacatgctggtc
gggcgtggcggcagtggtgtggaaccccatccgcactccagcctgcgggcgctggtctat
aaccctgacaacaatgacgccgcgcgcctgaccaatttccagggctggcgcaccggattt
tacgataaacagctgaatacggatatcgatcaggcgctgctcgaacgcgatccggaaaag
caaaagcaagattacttcgcgattcaggagcgctacgacgcgctgatcccggcgctggtg
ccgctgtcacagatggtcgattccatcgtggtgcgtaaggacgtcaaaaattatctgccg
cacccttccgctaccactttcctgcgtgacgtttataaagatgaaagtcaggcaactgct
ccttcagccggaggtaaagggttatga
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