Rivularia sp. PCC 7116: Riv7116_0326
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Entry
Riv7116_0326 CDS
T02364
Name
(GenBank) DNA polymerase III, gamma/tau subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv03030
DNA replication
riv03430
Mismatch repair
riv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Riv7116_0326
03430 Mismatch repair
Riv7116_0326
03440 Homologous recombination
Riv7116_0326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
riv03032
]
Riv7116_0326
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_0326
Enzymes [BR:
riv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Riv7116_0326
DNA replication proteins [BR:
riv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Riv7116_0326
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Riv7116_0326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Mg_chelatase
AAA_22
AAA_16
TcA_TcB_BD
Motif
Other DBs
NCBI-ProteinID:
AFY52930
LinkDB
All DBs
Position
complement(413515..414459)
Genome browser
AA seq
314 aa
AA seq
DB search
MDFFAPLIGQTQAVELLKQAVAKDRIAPAYLFVGSPGIGRSLAARCFLELLFSQNNKDIA
VVKSKLEKSNHPDLLWVQPSYQHQGKLFSAKEAAEKGLKRKAPPIIRLEQIREITEFLSR
PPLETSRNIVILEQAETMAESAANALLKTLEEPGKATLILIAPTPDSILTTLVSRCQKIP
FYCLDTAAMSQVLALSGHSEILNHPTVISIAAGSPGKAIEAYEQMQNIPLDLLRSCSQPP
KTYRSALELAKQIDKALDNEAQLWLVDYLQQSYWQNLRQPIIIQQLEKTRKSLLCYAQPR
LVWECMFLSLVVSR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttcgcgccgcttataggacaaactcaagcagtagaattattaaaacaagct
gttgcaaaagatagaattgcgccagcatatttgtttgtaggttctcctggaatcggacga
agtttagctgcaagatgctttttagaattattgtttagtcaaaataataaagacatcgct
gttgttaaaagcaaattagaaaaaagcaatcatcccgatttactttgggtacagccaagc
tatcaacatcaagggaaattgttcagtgcaaaagaggcagcagaaaaaggattaaaacgg
aaagcaccaccaataattaggttagaacagattcgcgaaattacagaatttctcagccgt
ccacctctagaaacatcgaggaatatagtaattttagagcaagccgaaacaatggcagaa
tcggcagcaaatgctttacttaaaactttggaagaaccgggaaaagcaacgctgatttta
atagcaccaacacccgattctatattgacaactttggtttcccgctgccaaaaaattcct
ttttactgtttagataccgcagcgatgtctcaagtactggcattatcgggacatagtgaa
atattgaatcatcctacagttataagtatcgccgcaggaagtccggggaaagccattgaa
gcatacgagcaaatgcagaatattcccttagatttactgcgctcctgtagtcaaccgccc
aaaacttaccgttctgcattggaattagcaaaacaaattgataaagcattagataatgaa
gcccaattatggttagttgattatttgcaacagtcatattggcagaatttgcgacaacca
ataattattcaacagcttgaaaaaacccgtaaatctttgctttgttatgctcaaccacgt
ttagtttgggagtgtatgtttttgtcgttggtggttagcaggtag
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