Rivularia sp. PCC 7116: Riv7116_0682
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Entry
Riv7116_0682 CDS
T02364
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
riv
Rivularia sp. PCC 7116
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
riv03032
]
Riv7116_0682
03036 Chromosome and associated proteins [BR:
riv03036
]
Riv7116_0682
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_0682
DNA replication proteins [BR:
riv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Riv7116_0682
Chromosome and associated proteins [BR:
riv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Riv7116_0682
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Riv7116_0682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Pox_C4_C10
Motif
Other DBs
NCBI-ProteinID:
AFY53272
UniProt:
K9R852
LinkDB
All DBs
Position
complement(866252..866536)
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AA seq
94 aa
AA seq
DB search
MNKGELVDAVSEKASVTKKQADAVLSAALETIIEAVSSGDKVTLVGFGSFESRERKAREG
RNPKTNEKMEIPATKVPAFSAGKLFRERVAPPKE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggtgaattagttgatgctgtatctgaaaaggctagcgtaaccaaaaagcaa
gccgatgcggttttgagcgctgctttggaaaccatcattgaggctgtttcttccggcgat
aaagtaacgttggtaggattcggttcttttgaatctcgcgaacgtaaagcacgcgaagga
cgcaaccctaaaaccaatgagaaaatggagattccagcaactaaggttcctgctttctcc
gcagggaaactctttagagaaagagttgctcccccaaaagagtaa
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