Rivularia sp. PCC 7116: Riv7116_0720
Help
Entry
Riv7116_0720 CDS
T02364
Name
(GenBank) DNA-directed RNA polymerase gamma chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Riv7116_0720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
riv03021
]
Riv7116_0720
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_0720
Enzymes [BR:
riv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Riv7116_0720
Transcription machinery [BR:
riv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Riv7116_0720
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Riv7116_0720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AFY53308
UniProt:
K9R6Z6
LinkDB
All DBs
Position
911591..913468
Genome browser
AA seq
625 aa
AA seq
DB search
MRNSQNNQFDYVKIGLASPERIRQWGERTLPNSQVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKG
IPSYISILLDMPLRDVEQIVYFNSYVVLAPGNAESLSYKQLLTEDQWLEIEDQIYSEDST
LEGVEVGIGAEALLRLLADIVLEPEAEKLREEITNAKGQKRAKLIKRLRVIDNFIATGSK
PEWMVMTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLNIHQCGLPREMAIELFQPFVINRLIRGGMVNNIKAAKKLIARSDPQVWDVLE
EVIEGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQSEARLLMLASNNILSPATGKPIITPSQDMVLGAYYLTAENPGASKGAGGYYASLND
VVMAYEQEQVDLHAYVYVRYDGEVEQDADDKKPVEVTDNEDGTRTLRYKFRRVREDEAGN
LLSQYIYTTPGRVIYNMAIQEALAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattctcaaaataatcaatttgattacgtaaaaattggtctggcttcacccgaa
cgtattcgccagtggggagaaagaactttacctaattctcaggtggttggagaagtaacc
aagccggaaactatcaactaccggactttgaagccagaaatggatgggctgttctgcgaa
agaatttttggtcctgctaaagactgggaatgtcattgcggtaaatataagagagtacgt
catagaggtattgtttgcgagcgctgcggtgtggaagtcaccgaatcaagagtgcgccgt
caccgcatgggctatataaagctagctgctcctgtagctcacgtttggtatctcaaaggt
attcccagctatatttccattctgctggatatgcctttaagggatgtagaacaaatagtt
tactttaattcttatgtagttctagctccaggaaatgcggaatccttaagttataagcag
ttactcacagaagaccaatggctggaaattgaagaccagatttacagcgaggattccact
ttagaaggtgtagaagttggtattggtgcggaagccttgctgcgtttgttagcggatatc
gtcttagagccagaggctgaaaaattacgtgaggaaataactaacgccaaaggtcaaaaa
agagccaagttgattaagcggttgcgggtaatagataactttatcgcgactggctcgaag
ccggaatggatggtaatgacagtgattccggtaattcctccagacttacgtccgatggta
cagcttgacggtggtcgttttgcgactagcgatttaaacgatttgtatcgacgggtgatc
aaccggaacaatcgtttggcaagattgcaggaaattctggcaccagaaattattgttcgt
aacgaaaaacgaatgctgcaagaagcagtagacgctcttattgataacggtcgtcggggg
cgtactgtagttggtgcaaacaatcgtccgctgaaatctttatccgacattattgaaggt
aaacaaggacgttttcgtcagaacttgttgggtaaacgggtagactattccggaagaagc
gtaattgtagttggtccgaagctaaatattcaccagtgcggtttgcctcgggaaatggca
attgaattattccagccttttgtaatcaatcgattaattaggggcggtatggtgaataac
atcaaagcggcgaagaaattaattgctcgttcggacccccaagtttgggatgttctggaa
gaagtgattgaaggacacccagttatgcttaaccgtgccccaactttacaccgtttgggt
attcaagcatttgagccaattttagtagaaggacgagcaattcaactgcatcctttggta
tgtccggcatttaacgccgactttgacggcgaccaaatggcagtacacgtacctttatct
ttggaatcgcaatcggaagccagattgttgatgctcgcttctaacaatatactttcacca
gctaccggtaagccgattattacacccagccaagacatggtactgggagcatattattta
acagcagaaaatcccggagcaagcaagggtgctgggggatattatgcatctttaaatgac
gtagtcatggcttacgaacaagaacaagtagatttgcacgcttatgtttacgtccgctac
gacggcgaagtagaacaagatgcggatgataaaaagcctgtagaagttacagacaacgaa
gatggtactcgtaccttacgctataaattccgtcgcgttagagaagatgaagcaggtaat
ttactatctcagtatatatatacaacgccgggtcgcgtaatttataacatggctattcaa
gaagctttagcaagttag
DBGET
integrated database retrieval system
