Rivularia sp. PCC 7116: Riv7116_1501
Help
Entry
Riv7116_1501 CDS
T02364
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Riv7116_1501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
riv03400
]
Riv7116_1501
Enzymes [BR:
riv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Riv7116_1501
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Riv7116_1501
DNA repair and recombination proteins [BR:
riv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Riv7116_1501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AFY54061
UniProt:
K9R9E2
LinkDB
All DBs
Position
complement(1887925..1888830)
Genome browser
AA seq
301 aa
AA seq
DB search
MPELPEVETVRRGLNQLTLKRKITGGDVLLDRTIAYPFSAEDFLNGLQQREITTWHRRGK
YLIAELSSVLEDKETREQGDKNSSSLATFSLPSSSLGVHLRMTGQLLWLNQNEPLHKHAR
VRLFFGEEWELRFVDQRTFGQMWWVPPKVETQSIITGLAKLAADPFSTEFTVDYLADKLK
NRRRPIKTALLDQSVVAGLGNIYADEALFLSRIQPQTLCLNLQREQIQRLHSAIIQVLKT
SIEAGGTTFSNFLNVQGVNGNYAHVAWVYNRTGEPCRTCSNPIERIKLAGRSSHFCPECQ
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
gtgccagaactaccagaagttgaaacagtccgacggggtttaaatcaattaacccttaag
cggaaaattacgggaggtgatgtgttgctcgatcgcaccattgcttacccgttttctgct
gaagattttttaaatggtctccaacaaagggaaataacaacttggcatcgtcgcggtaag
tacctaattgcagaacttagttcagttttagaagacaaggagacaagggaacaaggagac
aagaattcttcttccttagccactttcagcctcccctcctcctccctgggggttcattta
cgaatgactggtcagctattatggttgaatcaaaatgaacctttgcacaagcacgcgcga
gtcaggttgttctttggtgaagaatgggaattgcgcttcgtggatcagcgtacttttggt
cagatgtggtgggttcctccaaaggttgaaacgcaaagcattattaccggtttagcaaag
ctagcagcagaccctttttcaacagaattcactgtagactatcttgcagacaaactcaaa
aatcgccgccgccctatcaagactgcgctactagatcaatctgtggtggcggggttaggt
aatatttatgctgatgaagcgttgtttcttagtagaatacaaccccaaaccctgtgtcta
aatttgcaaagagaacagatacagcgtctgcattctgcgattattcaagtcttaaaaact
agtattgaagctggtggtactactttcagtaatttcttgaatgtacaaggcgtgaatggt
aactacgcacatgtagcttgggtttacaaccgcaccggagaaccttgtcgaacttgtagc
aatccaattgagcgaattaagttagcgggaagatccagtcatttttgtcccgagtgtcag
cagtga
DBGET
integrated database retrieval system
