Rivularia sp. PCC 7116: Riv7116_1660
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Entry
Riv7116_1660 CDS
T02364
Name
(GenBank) spermidine/putrescine-binding periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
riv
Rivularia sp. PCC 7116
Pathway
riv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
riv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Riv7116_1660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
riv02000
]
Riv7116_1660
Transporters [BR:
riv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Riv7116_1660
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
MshEN
Motif
Other DBs
NCBI-ProteinID:
AFY54210
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Position
2074524..2075483
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AA seq
319 aa
AA seq
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MRNSRLKVLSWQGGWGSAFWRCVAEPLTARFGIEVEIFPHVGLSLPDPLPQVDLVWCNTI
AAHKAASLGQVLPCSPQIKDVCAALSSRILGVLDGIVHTYSIPYVLVYNHKRVSSFDSWQ
DLLKPEYCGKIAFYPGGNGFFPIAQVIAGGCLEEMPDNMTPCWRFLEQLVPQLGSLDYSI
GMEKLFEQEKILLAFRALTNALAFEQAGLPVSWMIPKEGTCVTEDGFFIPKGTEKAQVEA
AELLIQFALTPNVQTQWCKALGAIPMHLSAQTPELLVDHPLLPSAPEAMDKLLRLPKAVE
LHHSLEWEKKFSQLVLLSA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagaaactcgcgattaaaagtccttagctggcagggtggttggggaagtgccttttgg
cggtgtgtcgctgaaccgcttacagcacgctttggcatcgaggtagagatttttcctcat
gtgggactgagcttgcccgatcctttgccacaggtagatttggtttggtgtaatacgatt
gcagcccataaagcagcgagtcttggacaggttctcccttgttctcctcaaataaaagat
gtctgtgccgctttatcttcaagaattttgggcgttttagatgggattgtacatacttat
tccataccttatgtgttagtttacaatcataagcgcgtgtcatcttttgatagttggcaa
gatctacttaaaccagaatactgtggaaaaattgcattttacccaggagggaatggtttt
ttcccgattgcccaagtcattgctggtggatgcttagaggaaatgccagataacatgaca
ccgtgctggcgttttttggaacaactggtgccgcagttgggttctttggattacagcatt
ggcatggaaaaattgtttgaacaagaaaaaatcctactggcttttagagccttaaccaat
gccttagcatttgaacaagcaggcttacctgtaagttggatgattcccaaagaaggtact
tgcgtgacagaggatggtttttttatacctaaaggcacagaaaaggctcaagttgaagcg
gccgagttattaattcaatttgctctaacccctaatgtacaaacccagtggtgcaaggct
ttaggtgctattccgatgcatttgtcagcacaaacgcctgagttgctcgtcgatcatcct
ttattgccatcggctccagaggctatggataaacttttgcgtttgcctaaggcagtagaa
ctgcatcatagtctcgaatgggaaaagaaattttctcaattggtcttattatcagcttaa
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